Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | E8M85_RS05830 | Genome accession | NZ_CP040016 |
| Coordinates | 1086148..1086450 (+) | Length | 100 a.a. |
| NCBI ID | WP_002855822.1 | Uniprot ID | A0A1E7NY14 |
| Organism | Campylobacter jejuni subsp. jejuni strain 9090 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1081148..1091450
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E8M85_RS05805 (E8M85_05890) | rpsR | 1081511..1081771 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| E8M85_RS05810 (E8M85_05895) | lon | 1081831..1084206 (-) | 2376 | WP_002853487.1 | endopeptidase La | - |
| E8M85_RS05815 (E8M85_05900) | - | 1084223..1084870 (-) | 648 | WP_002852961.1 | outer membrane protein assembly factor BamD | - |
| E8M85_RS05820 (E8M85_05905) | fliW | 1085031..1085420 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| E8M85_RS05825 (E8M85_05910) | proC | 1085420..1086151 (+) | 732 | WP_002869050.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| E8M85_RS05830 (E8M85_05915) | ctsT | 1086148..1086450 (+) | 303 | WP_002855822.1 | transformation system protein | Machinery gene |
| E8M85_RS05835 (E8M85_05920) | - | 1086447..1087109 (+) | 663 | WP_002866103.1 | hypothetical protein | - |
| E8M85_RS05840 (E8M85_05925) | - | 1087106..1087558 (+) | 453 | WP_002869049.1 | hypothetical protein | - |
| E8M85_RS05845 (E8M85_05930) | hemD | 1087555..1088184 (-) | 630 | WP_002856298.1 | uroporphyrinogen-III synthase | - |
| E8M85_RS05850 (E8M85_05935) | thiE | 1088162..1088794 (-) | 633 | WP_178890898.1 | thiamine phosphate synthase | - |
| E8M85_RS05855 (E8M85_05940) | thiD | 1088784..1089596 (-) | 813 | WP_002869047.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| E8M85_RS05860 (E8M85_05945) | - | 1089593..1090279 (-) | 687 | WP_002869046.1 | 3-methyladenine DNA glycosylase | - |
| E8M85_RS05865 (E8M85_05950) | - | 1090276..1091037 (-) | 762 | WP_002856328.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12150.21 Da Isoelectric Point: 6.2957
>NTDB_id=361610 E8M85_RS05830 WP_002855822.1 1086148..1086450(+) (ctsT) [Campylobacter jejuni subsp. jejuni strain 9090]
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYTQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=361610 E8M85_RS05830 WP_002855822.1 1086148..1086450(+) (ctsT) [Campylobacter jejuni subsp. jejuni strain 9090]
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGTATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATACTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCCATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
100 |
100 |
1 |