Detailed information NTG0361584

Bioinformatically predicted

Overview

• Name: waaF
• Type: Regulator
• Locus tag: E8N02_RS06165
• Genome accession: NZ_CP040015
• Coordinates: 1202979..1203938 (+)
• Length: 319 a.a.
• NCBI ID: WP_002935343.1
• Uniprot ID: -
• Organism: Campylobacter jejuni subsp. jejuni strain LDG17f
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 1197979..1208938

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
E8N02_RS06140 (E8N02_06200)	neuC	1198569..1199693 (+)	1125	WP_002859249.1	UDP-N-acetylglucosamine 2-epimerase	-
E8N02_RS06145 (E8N02_06205)	-	1199686..1200633 (+)	948	WP_002896736.1	glycosyltransferase	-
E8N02_RS06150 (E8N02_06210)	-	1200630..1201295 (+)	666	WP_032585167.1	acylneuraminate cytidylyltransferase family protein	-
E8N02_RS06155 (E8N02_06215)	-	1201419..1202168 (+)	750	WP_052775749.1	CatB-related O-acetyltransferase	-
E8N02_RS06160 (E8N02_06220)	waaV	1202108..1202920 (-)	813	WP_002935342.1	glycosyltransferase family 2 protein	-
E8N02_RS06165 (E8N02_06225)	waaF	1202979..1203938 (+)	960	WP_002935343.1	lipopolysaccharide heptosyltransferase II	Regulator
E8N02_RS06170 (E8N02_06230)	gmhA	1203919..1204479 (-)	561	WP_032585170.1	D-sedoheptulose 7-phosphate isomerase	-
E8N02_RS06175 (E8N02_06235)	rfaE1	1204476..1205861 (-)	1386	WP_052805707.1	D-glycero-beta-D-manno-heptose-7-phosphate kinase	-
E8N02_RS06180 (E8N02_06240)	rfaD	1205854..1206807 (-)	954	WP_002873533.1	ADP-glyceromanno-heptose 6-epimerase	-
E8N02_RS06185 (E8N02_06245)	gmhB	1206804..1207368 (-)	565	Protein_1213	D-glycero-alpha-D-manno-heptose-1,7-bisphosphate 7-phosphatase	-
E8N02_RS06190 (E8N02_06250)	-	1207449..1207751 (+)	303	WP_002852762.1	cytochrome c	-
E8N02_RS06195 (E8N02_06255)	ccoS	1207774..1207980 (-)	207	WP_002852798.1	cbb3-type cytochrome oxidase assembly protein CcoS	-

Sequence

Protein

• Length: 319 a.a.
• Molecular weight: 36740.45 Da
• Isoelectric Point: 10.3627

>NTDB_id=361584 E8N02_RS06165 WP_002935343.1 1202979..1203938(+) (waaF) [Campylobacter jejuni subsp. jejuni strain LDG17f]
MKIFIHLPTWLGDAVMASLALYAIKEHFKNAQFILYGSLVSTALFKEFPNSKIIIENKLSRYKQALSLRKELGKIDFSFA
FRSAFSSKIILHILKTKQRYFFDKNKHKEEHQVLKYLYFIENSLSIKAHFKDLKLPFKLKFQNPLVLKNGKKILGLNPGA
SFGSAKRWDASYFAKVALNFSQSHEILIFGAGKVEQELCNEIYQILKEQNIKVKNLCNKTTIKTLCQNIAFCDLFITNDS
GPMHLSAVYKVKTVAIFGPTKFTQTSPWQNQNAKLVHLDLACMPCMQKICPLKHHKCMKDLKPQRVIEEARNLLKNPHL

Nucleotide

• Length: 960 bp

>NTDB_id=361584 E8N02_RS06165 WP_002935343.1 1202979..1203938(+) (waaF) [Campylobacter jejuni subsp. jejuni strain LDG17f]
ATGAAAATTTTTATACATCTTCCCACTTGGCTAGGCGATGCAGTGATGGCTTCACTTGCTTTATACGCTATAAAAGAACA
TTTTAAAAATGCTCAATTTATCCTTTATGGATCTTTGGTTTCCACAGCACTTTTTAAAGAATTTCCTAATTCTAAAATCA
TCATAGAAAATAAACTATCCCGTTATAAACAAGCTCTATCTTTACGCAAAGAACTTGGTAAGATCGATTTTAGCTTTGCT
TTTAGATCTGCGTTTTCTTCTAAGATTATCTTACATATTCTTAAAACAAAACAAAGATATTTTTTTGACAAAAACAAGCA
CAAAGAAGAACATCAAGTTTTAAAATACCTTTATTTTATAGAAAACTCACTTAGTATAAAAGCTCATTTTAAAGACTTAA
AGCTTCCCTTTAAGCTAAAATTTCAAAACCCTCTTGTCTTAAAAAATGGCAAAAAAATTCTAGGACTCAACCCTGGCGCA
AGCTTTGGAAGTGCAAAAAGATGGGATGCGAGTTATTTTGCTAAAGTAGCTTTAAATTTCAGCCAAAGTCATGAGATTTT
AATCTTTGGTGCAGGAAAAGTCGAACAAGAACTTTGTAATGAAATTTATCAAATTTTAAAAGAACAAAACATAAAAGTAA
AAAATCTTTGCAATAAAACCACCATCAAAACCCTTTGTCAAAATATTGCTTTTTGTGATCTTTTCATAACAAATGACAGT
GGTCCTATGCACCTAAGTGCGGTTTATAAGGTAAAAACCGTGGCTATTTTTGGCCCTACGAAATTTACTCAAACTTCACC
TTGGCAAAATCAAAACGCAAAATTAGTACACTTAGATCTAGCTTGTATGCCTTGTATGCAAAAAATCTGCCCTTTAAAAC
ACCACAAATGCATGAAAGATTTAAAGCCTCAAAGGGTTATAGAAGAAGCTAGAAATTTACTTAAAAACCCTCATCTATAA

Domains

Predicted by InterproScan.

• Glycosyltransferase family 9 (heptosyltransferase) (Glyco_transf_9) (96-294)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
waaF	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	94.357	100	0.944