Detailed information
Bioinformatically predicted
Overview
| Name | ctsT | Type | Machinery gene |
| Locus tag | E8N02_RS05825 | Genome accession | NZ_CP040015 |
| Coordinates | 1134495..1134797 (+) | Length | 100 a.a. |
| NCBI ID | WP_002853046.1 | Uniprot ID | Q0P9H7 |
| Organism | Campylobacter jejuni subsp. jejuni strain LDG17f | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1129495..1139797
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E8N02_RS05800 (E8N02_05860) | rpsR | 1129858..1130118 (+) | 261 | WP_002853032.1 | 30S ribosomal protein S18 | - |
| E8N02_RS05805 (E8N02_05865) | lon | 1130178..1132553 (-) | 2376 | WP_002853487.1 | endopeptidase La | - |
| E8N02_RS05810 (E8N02_05870) | - | 1132570..1133217 (-) | 648 | WP_002860191.1 | outer membrane protein assembly factor BamD | - |
| E8N02_RS05815 (E8N02_05875) | fliW | 1133378..1133767 (+) | 390 | WP_002852982.1 | flagellar assembly protein FliW | - |
| E8N02_RS05820 (E8N02_05880) | proC | 1133767..1134498 (+) | 732 | WP_002859150.1 | pyrroline-5-carboxylate reductase | Machinery gene |
| E8N02_RS05825 (E8N02_05885) | ctsT | 1134495..1134797 (+) | 303 | WP_002853046.1 | type II secretion system protein | Machinery gene |
| E8N02_RS05830 (E8N02_05890) | - | 1134794..1135456 (+) | 663 | WP_002858296.1 | hypothetical protein | - |
| E8N02_RS05835 (E8N02_05895) | - | 1135453..1135905 (+) | 453 | WP_002859148.1 | hypothetical protein | - |
| E8N02_RS05840 (E8N02_05900) | hemD | 1135902..1136531 (-) | 630 | WP_002869541.1 | uroporphyrinogen-III synthase | - |
| E8N02_RS05845 (E8N02_05905) | thiE | 1136509..1137141 (-) | 633 | WP_002852670.1 | thiamine phosphate synthase | - |
| E8N02_RS05850 (E8N02_05910) | thiD | 1137131..1137943 (-) | 813 | WP_178895688.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| E8N02_RS05855 (E8N02_05915) | - | 1137940..1138626 (-) | 687 | WP_002852847.1 | endonuclease III domain-containing protein | - |
| E8N02_RS05860 (E8N02_05920) | - | 1138623..1139384 (-) | 762 | WP_032585146.1 | ATP-binding protein | - |
Sequence
Protein
Download Length: 100 a.a. Molecular weight: 12162.27 Da Isoelectric Point: 6.2957
>NTDB_id=361582 E8N02_RS05825 WP_002853046.1 1134495..1134797(+) (ctsT) [Campylobacter jejuni subsp. jejuni strain LDG17f]
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
MKKAFILIESISAITIISLIFIGIFYYYIQLYKNYENLNIFERLYKLQEELYEKPIFKTIILQTSALKPIVLQEQFVNDG
IFQFQKLYFQDQNYSVYFKE
Nucleotide
Download Length: 303 bp
>NTDB_id=361582 E8N02_RS05825 WP_002853046.1 1134495..1134797(+) (ctsT) [Campylobacter jejuni subsp. jejuni strain LDG17f]
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
ATGAAAAAGGCTTTCATACTTATAGAAAGCATTAGTGCTATAACGATCATATCTTTAATTTTCATTGGCATTTTTTATTA
CTATATTCAACTTTACAAAAACTATGAAAATTTAAATATTTTTGAAAGACTCTATAAACTTCAAGAAGAATTATATGAAA
AGCCTATTTTTAAAACCATCATACTTCAAACTTCAGCCTTAAAACCTATAGTTTTACAAGAACAGTTTGTTAATGATGGT
ATATTTCAATTTCAAAAATTATACTTTCAAGATCAAAATTATAGCGTTTATTTTAAAGAATGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsT | Campylobacter jejuni subsp. jejuni 81-176 |
99 |
100 |
0.99 |