Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   E3T04_RS13145 Genome accession   NZ_CP047782
Coordinates   2602558..2603358 (+) Length   266 a.a.
NCBI ID   WP_000088649.1    Uniprot ID   A0A7U7JRT9
Organism   Staphylococcus aureus strain UP_1352     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2597558..2608358
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E3T04_RS13130 (E3T04_13130) walK 2598228..2600054 (+) 1827 WP_000871607.1 cell wall metabolism sensor histidine kinase WalK -
  E3T04_RS13135 (E3T04_13135) yycH 2600047..2601381 (+) 1335 WP_001060137.1 two-component system activity regulator YycH -
  E3T04_RS13140 (E3T04_13140) - 2601382..2602170 (+) 789 WP_001104169.1 two-component system regulatory protein YycI -
  E3T04_RS13145 (E3T04_13145) vicX 2602558..2603358 (+) 801 WP_000088649.1 MBL fold metallo-hydrolase Regulator
  E3T04_RS13150 (E3T04_13150) adsA 2603585..2605903 (+) 2319 WP_160200034.1 LPXTG-anchored adenosine synthase AdsA -
  E3T04_RS13155 (E3T04_13155) rlmH 2606271..2606750 (+) 480 WP_000704773.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30313.52 Da        Isoelectric Point: 6.3392

>NTDB_id=361541 E3T04_RS13145 WP_000088649.1 2602558..2603358(+) (vicX) [Staphylococcus aureus strain UP_1352]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=361541 E3T04_RS13145 WP_000088649.1 2602558..2603358(+) (vicX) [Staphylococcus aureus strain UP_1352]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TTTATTAGTTGATGTTGGTTTGACTGGCAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGCAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGATCATATTAAAGGATTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACAAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAACGTGTCACATGATGCAATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTAACGGATACAGGTTACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGCGACGCGTTTATTTTTGAGAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGCGATATGGGTCATGTATCTAATGAGGATGCGGGTCATGCGATGACAGACGTGATTACAGGTAACACGA
AACGTATTTACCTATCGCATTTATCACAAGATAATAACATGAAAGATTTGGCGCGTATGAGTGTTGGCCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7JRT9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.027

96.617

0.474

Multiple sequence alignment