Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   E3T12_RS13005 Genome accession   NZ_CP047779
Coordinates   2582601..2583401 (+) Length   266 a.a.
NCBI ID   WP_000088649.1    Uniprot ID   A0A7U7JRT9
Organism   Staphylococcus aureus strain UP_1559     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 2577601..2588401
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E3T12_RS12990 (E3T12_12990) walK 2578271..2580097 (+) 1827 WP_000871610.1 cell wall metabolism sensor histidine kinase WalK -
  E3T12_RS12995 (E3T12_12995) yycH 2580090..2581424 (+) 1335 WP_001060146.1 two-component system activity regulator YycH -
  E3T12_RS13000 (E3T12_13000) - 2581425..2582213 (+) 789 WP_001104171.1 two-component system regulatory protein YycI -
  E3T12_RS13005 (E3T12_13005) vicX 2582601..2583401 (+) 801 WP_000088649.1 MBL fold metallo-hydrolase Regulator
  E3T12_RS13010 (E3T12_13010) adsA 2583628..2585946 (+) 2319 WP_000645754.1 LPXTG-anchored adenosine synthase AdsA -
  E3T12_RS13015 (E3T12_13015) rlmH 2586314..2586793 (+) 480 WP_000704775.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  E3T12_RS14620 - 2586913..2587398 (+) 486 WP_164005812.1 AAA family ATPase -

Sequence

Protein


Download         Length: 266 a.a.        Molecular weight: 30313.52 Da        Isoelectric Point: 6.3392

>NTDB_id=361273 E3T12_RS13005 WP_000088649.1 2582601..2583401(+) (vicX) [Staphylococcus aureus strain UP_1559]
MSRLIRMSVLASGSTGNATFVENEKGSLLVDVGLTGKKMEELFSQIDRNIQDLNGILVTHEHIDHIKGLGVLARKYQLPI
YANEKTWQAIEKKDSRIPMDQKFIFNPYETKSIAGFDVESFNVSHDAIDPQFYIFHNNYKKFTILTDTGYVSDRMKGMIR
GSDAFIFESNHDVDMLRMCRYPWKTKQRILGDMGHVSNEDAGHAMTDVITGNTKRIYLSHLSQDNNMKDLARMSVGQVLN
EHDIDTEKEVLLCDTDKAIPTPIYTI

Nucleotide


Download         Length: 801 bp        

>NTDB_id=361273 E3T12_RS13005 WP_000088649.1 2582601..2583401(+) (vicX) [Staphylococcus aureus strain UP_1559]
ATGAGCCGCTTGATACGCATGAGTGTATTAGCAAGTGGTAGTACAGGTAACGCCACTTTTGTAGAAAATGAAAAAGGTAG
TCTATTAGTTGATGTTGGTTTGACTGGCAAGAAAATGGAAGAATTGTTTAGTCAAATTGACCGTAATATTCAAGATTTAA
ATGGTATTTTAGTAACCCATGAACATATTGATCATATTAAAGGATTAGGTGTTTTGGCGCGTAAATATCAATTGCCAATT
TATGCGAATGAAAAGACTTGGCAGGCAATTGAAAAGAAAGATAGTCGCATCCCTATGGATCAGAAATTCATTTTTAATCC
TTATGAAACGAAATCTATTGCAGGTTTCGATGTTGAATCGTTTAACGTGTCACATGATGCGATAGATCCGCAATTTTATA
TTTTCCATAATAACTATAAGAAGTTTACGATTTTAACGGATACGGGTTACGTGTCTGATCGTATGAAAGGTATGATACGT
GGCAGCGATGCGTTTATTTTTGAAAGTAATCATGACGTCGATATGTTGAGAATGTGTCGTTATCCATGGAAGACGAAACA
ACGTATTTTAGGCGATATGGGTCATGTATCTAATGAGGATGCGGGTCATGCGATGACAGACGTGATTACAGGTAACACGA
AACGTATTTACCTATCGCATTTATCACAAGATAATAACATGAAAGATTTGGCGCGTATGAGTGTTGGCCAAGTATTGAAC
GAACACGATATTGATACGGAAAAAGAAGTATTGCTATGTGATACGGATAAAGCTATTCCAACGCCAATATATACAATATA
A

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(14-220)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7U7JRT9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

49.027

96.617

0.474