Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   FCJ76_RS07795 Genome accession   NZ_CP039935
Coordinates   1478420..1478995 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis strain H19     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1473420..1483995
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FCJ76_RS07765 dapD 1473605..1474315 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  FCJ76_RS07770 dapI 1474385..1475509 (+) 1125 WP_106073886.1 N-acetyldiaminopimelate deacetylase -
  FCJ76_RS07775 ykuS 1475571..1475816 (+) 246 WP_003232382.1 YkuS family protein -
  FCJ76_RS07780 mscT 1475853..1476656 (-) 804 WP_137200745.1 small-conductance mechanosensitive channel protein MscT -
  FCJ76_RS07785 ahpA 1476893..1477435 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  FCJ76_RS07790 ykuV 1477505..1477951 (+) 447 WP_134983051.1 thiol-disulfide oxidoreductase YkuV -
  FCJ76_RS07795 rok 1478420..1478995 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  FCJ76_RS07800 cse15 1479036..1480001 (-) 966 WP_076457764.1 spore protein Cse15 -
  FCJ76_RS07805 mobA 1480138..1480737 (+) 600 WP_014479670.1 molybdenum cofactor guanylyltransferase -
  FCJ76_RS07810 moeB 1480788..1481807 (+) 1020 WP_128737813.1 molybdopterin-synthase adenylyltransferase MoeB -
  FCJ76_RS07815 glp 1481825..1483117 (+) 1293 WP_003232372.1 gephyrin-like molybdotransferase Glp -
  FCJ76_RS07820 mobB 1483078..1483599 (+) 522 WP_029725925.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=361122 FCJ76_RS07795 WP_003232378.1 1478420..1478995(+) (rok) [Bacillus subtilis strain H19]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=361122 FCJ76_RS07795 WP_003232378.1 1478420..1478995(+) (rok) [Bacillus subtilis strain H19]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACATTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCTAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1

Multiple sequence alignment