Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   FCJ76_RS07685 Genome accession   NZ_CP039935
Coordinates   1459191..1459655 (-) Length   154 a.a.
NCBI ID   WP_086343783.1    Uniprot ID   -
Organism   Bacillus subtilis strain H19     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1454191..1464655
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FCJ76_RS07665 kinA 1454658..1456478 (+) 1821 WP_015252197.1 sporulation histidine kinase KinA -
  FCJ76_RS07670 dapX 1456488..1457669 (-) 1182 WP_014476653.1 aminotransferase A -
  FCJ76_RS07675 - 1457871..1458032 (-) 162 WP_003245246.1 hypothetical protein -
  FCJ76_RS07680 cheV 1458236..1459147 (+) 912 WP_014476655.1 chemotaxis protein CheV -
  FCJ76_RS07685 kre 1459191..1459655 (-) 465 WP_086343783.1 YkyB family protein Regulator
  FCJ76_RS07690 ykuC 1459781..1461073 (-) 1293 WP_014479656.1 MFS transporter -
  FCJ76_RS07695 ltdD 1461149..1461643 (-) 495 WP_128738607.1 L,D-transpeptidase family protein -
  FCJ76_RS07700 ppeE 1461700..1462557 (-) 858 WP_128737811.1 metallophosphoesterase -
  FCJ76_RS07705 fadH 1462700..1463464 (+) 765 WP_015383534.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17865.68 Da        Isoelectric Point: 10.3545

>NTDB_id=361121 FCJ76_RS07685 WP_086343783.1 1459191..1459655(-) (kre) [Bacillus subtilis strain H19]
MDDHAYAKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQEYVGMKEKPLVPNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=361121 FCJ76_RS07685 WP_086343783.1 1459191..1459655(-) (kre) [Bacillus subtilis strain H19]
ATGGACGACCATGCATATGCGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAATCGTACCGAAA
TCCTAAAGCTCAAATGTCTTTAACAAAAGCGAAACACCTATTGCAAGAATATGTCGGCATGAAAGAAAAGCCGCTAGTGC
CAAATCGCCAGCAGCCAGCTTACCATAAACCGGTCTTTAAAAAACTTGGCGAGAGTTACTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

99.351

100

0.994

Multiple sequence alignment