Detailed information    

insolico Bioinformatically predicted

Overview

Name   med   Type   Regulator
Locus tag   FCJ76_RS06200 Genome accession   NZ_CP039935
Coordinates   1190069..1191022 (+) Length   317 a.a.
NCBI ID   WP_014476425.1    Uniprot ID   A0A0K6M9I2
Organism   Bacillus subtilis strain H19     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1185069..1196022
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FCJ76_RS06175 argF 1186900..1187859 (+) 960 WP_134982186.1 ornithine carbamoyltransferase -
  FCJ76_RS06180 yjzC 1187945..1188124 (+) 180 WP_003245356.1 YjzC family protein -
  FCJ76_RS06185 yjzD 1188170..1188355 (-) 186 WP_003245236.1 DUF2929 domain-containing protein -
  FCJ76_RS06190 - 1188605..1189339 (+) 735 WP_003245223.1 hypothetical protein -
  FCJ76_RS06195 - 1189421..1189978 (+) 558 WP_137200718.1 hypothetical protein -
  FCJ76_RS06200 med 1190069..1191022 (+) 954 WP_014476425.1 transcriptional regulator Med Regulator
  FCJ76_RS06205 comZ 1191037..1191228 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  FCJ76_RS06210 yjzB 1191258..1191494 (-) 237 WP_015383342.1 spore coat protein YjzB -
  FCJ76_RS06215 fabH 1191659..1192597 (+) 939 WP_003232971.1 beta-ketoacyl-ACP synthase III -
  FCJ76_RS06220 fabF 1192620..1193861 (+) 1242 WP_003244890.1 beta-ketoacyl-ACP synthase II -
  FCJ76_RS06225 yjaZ 1193937..1194722 (+) 786 WP_134982187.1 DUF2268 domain-containing protein -
  FCJ76_RS06230 appD 1194914..1195900 (+) 987 WP_134982188.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 35310.84 Da        Isoelectric Point: 4.6031

>NTDB_id=361112 FCJ76_RS06200 WP_014476425.1 1190069..1191022(+) (med) [Bacillus subtilis strain H19]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSKYNVDVYYKEGVKTEEDIINAIED
FHKRGVNLLYGHGSEYAEVFNLVGEDYPDMEFVISNAKAKADNVTSVHFSGEAMGFFGGMTAAHMSKTNQVGVIASFTWQ
PEVDGFIKGAKYENPDIEVNTKYTDHWDDDTTAVKLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFNKGTLEGGDHYYDLNTGVVEMGTFSPLVDKDFQQRIAKLIKTYNKTGELPKNE

Nucleotide


Download         Length: 954 bp        

>NTDB_id=361112 FCJ76_RS06200 WP_014476425.1 1190069..1191022(+) (med) [Bacillus subtilis strain H19]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTGAGTGGATGTGGACAAACTCCGTTCAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCCAAATACAATGTGGACGTCTATTATAAAGAAGGCGTTAAAACAGAAGAAGATATCATAAATGCGATTGAGGAT
TTTCATAAGAGGGGCGTCAATCTGCTCTACGGTCATGGGAGTGAATATGCTGAGGTGTTTAACTTGGTCGGCGAAGATTA
TCCAGATATGGAATTCGTCATTTCCAATGCGAAAGCGAAAGCTGATAATGTAACGAGTGTCCATTTCAGCGGGGAAGCAA
TGGGCTTTTTTGGAGGAATGACTGCTGCCCATATGTCGAAAACGAATCAGGTCGGTGTAATTGCTTCCTTTACGTGGCAG
CCTGAGGTTGACGGTTTTATCAAAGGGGCCAAGTATGAAAATCCGGATATAGAGGTGAATACGAAATATACGGATCATTG
GGATGATGATACAACAGCAGTAAAGCTTTATCAGAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCCGCCGGAGACG
GGTATAATGTCCCTGTTATTCAGCAAATCAAAAAAGACGGTCTTTATGCCATAGGCTATGTCACAGATCAATCGGATCTG
GGCGAGAATACCGTATTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATCATTGCTGAACAATTTAATAAAGG
CACCCTTGAGGGCGGCGATCATTACTACGACCTGAACACGGGAGTCGTTGAGATGGGAACATTCAGCCCGCTCGTCGATA
AAGACTTTCAGCAAAGAATCGCTAAGCTGATCAAAACATACAACAAAACAGGCGAGCTGCCAAAAAACGAGTAA

Domains

Predicted by InterproScan.

ABC transporter substrate-binding protein PnrA-like (Bmp)

(27-317)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0K6M9I2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

99.685

100

0.997

Multiple sequence alignment