Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   FCJ76_RS04680 Genome accession   NZ_CP039935
Coordinates   909116..909910 (+) Length   264 a.a.
NCBI ID   WP_134982866.1    Uniprot ID   -
Organism   Bacillus subtilis strain H19     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 904116..914910
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FCJ76_RS04650 sxzA 904956..905987 (+) 1032 WP_134982861.1 iron ABC transporter permease -
  FCJ76_RS04655 yfhB 906102..906983 (+) 882 WP_063335720.1 PhzF family phenazine biosynthesis protein -
  FCJ76_RS04660 yfhC 907071..907655 (+) 585 WP_129092338.1 nitroreductase -
  FCJ76_RS04665 yfhD 907694..907885 (-) 192 WP_014479215.1 YfhD family protein -
  FCJ76_RS04670 yfhE 907951..908061 (-) 111 WP_003223230.1 YfhE family protein -
  FCJ76_RS04675 yfhF 908116..909027 (-) 912 WP_130573256.1 TIGR01777 family oxidoreductase -
  FCJ76_RS04680 recX 909116..909910 (+) 795 WP_134982866.1 recombination regulator RecX Regulator
  FCJ76_RS04685 yfhH 909912..910226 (+) 315 WP_024573179.1 YfhH family protein -
  FCJ76_RS04690 yfhI 910369..911562 (+) 1194 WP_072692836.1 MFS transporter -
  FCJ76_RS04695 sspK 911594..911746 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  FCJ76_RS04700 yfhJ 911871..912140 (+) 270 WP_003243789.1 YfhJ family protein -
  FCJ76_RS04705 yfhK 912285..912803 (+) 519 WP_137200672.1 SH3 domain-containing protein -
  FCJ76_RS04710 spdL 912888..913205 (+) 318 WP_021481164.1 SdpC immunity protein SpdL -
  FCJ76_RS04715 ephM 913207..914067 (+) 861 WP_014479220.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 30997.27 Da        Isoelectric Point: 6.9997

>NTDB_id=361104 FCJ76_RS04680 WP_134982866.1 909116..909910(+) (recX) [Bacillus subtilis strain H19]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDVTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKELKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=361104 FCJ76_RS04680 WP_134982866.1 909116..909910(+) (recX) [Bacillus subtilis strain H19]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAGATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGTTACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAACATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACTAAAGAACTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACAG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.621

100

0.996

Multiple sequence alignment