Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | GVI77_RS18030 | Genome accession | NZ_CP047710 |
| Coordinates | 3773012..3773452 (+) | Length | 146 a.a. |
| NCBI ID | WP_000360914.1 | Uniprot ID | A0A0H2YVZ3 |
| Organism | Escherichia coli strain Eco-15 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 3768012..3778452
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GVI77_RS18010 (GVI77_18005) | aroP | 3769012..3770382 (+) | 1371 | WP_000399017.1 | aromatic amino acid transporter AroP | - |
| GVI77_RS18015 (GVI77_18010) | ampE | 3770425..3771279 (-) | 855 | WP_000171980.1 | beta-lactamase regulator AmpE | - |
| GVI77_RS18020 (GVI77_18015) | ampD | 3771276..3771827 (-) | 552 | WP_000923703.1 | 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD | - |
| GVI77_RS18025 (GVI77_18020) | nadC | 3771915..3772808 (+) | 894 | WP_001135168.1 | carboxylating nicotinate-nucleotide diphosphorylase | - |
| GVI77_RS18030 (GVI77_18025) | pilA | 3773012..3773452 (+) | 441 | WP_000360914.1 | prepilin peptidase-dependent pilin | Machinery gene |
| GVI77_RS18035 (GVI77_18030) | pilB | 3773462..3774847 (+) | 1386 | WP_001025180.1 | type II secretion system protein GspE | Machinery gene |
| GVI77_RS18040 (GVI77_18035) | hofC | 3774837..3776039 (+) | 1203 | WP_000157289.1 | protein transport protein HofC | - |
| GVI77_RS18045 (GVI77_18040) | guaC | 3776074..3777117 (-) | 1044 | WP_001217320.1 | GMP reductase | - |
| GVI77_RS18050 | - | 3777273..3777317 (-) | 45 | WP_120795372.1 | protein YacM | - |
| GVI77_RS18055 (GVI77_18045) | coaE | 3777342..3777962 (+) | 621 | WP_001269520.1 | dephospho-CoA kinase | - |
Sequence
Protein
Download Length: 146 a.a. Molecular weight: 15620.77 Da Isoelectric Point: 4.5237
>NTDB_id=360978 GVI77_RS18030 WP_000360914.1 3773012..3773452(+) (pilA) [Escherichia coli strain Eco-15]
MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYRTAVELCALEHGGLNTCDGGSNGIPSPTTTR
YVSAMSVAKGVVSLTGQESLNGLSVVMTPGWDNANGVTGWTRNCNIQSDSALQQACEDVFRFDDAN
MDKQRGFTLIELMVVIGIIAILSAIGIPAYQNYLRKAALTDMLQTFVPYRTAVELCALEHGGLNTCDGGSNGIPSPTTTR
YVSAMSVAKGVVSLTGQESLNGLSVVMTPGWDNANGVTGWTRNCNIQSDSALQQACEDVFRFDDAN
Nucleotide
Download Length: 441 bp
>NTDB_id=360978 GVI77_RS18030 WP_000360914.1 3773012..3773452(+) (pilA) [Escherichia coli strain Eco-15]
ATGGACAAGCAACGCGGTTTTACACTTATTGAACTGATGGTGGTTATTGGCATCATTGCCATTTTAAGCGCCATTGGTAT
TCCCGCTTATCAAAACTACCTGCGCAAAGCCGCACTCACCGACATGCTACAAACCTTTGTGCCTTACCGTACCGCCGTAG
AGTTGTGCGCGCTGGAACATGGTGGATTAAATACCTGCGACGGTGGCAGCAATGGCATTCCTTCGCCTACCACCACCCGC
TATGTTTCAGCCATGAGTGTGGCAAAGGGCGTGGTGTCGCTGACCGGGCAAGAAAGTCTCAATGGGCTAAGCGTCGTCAT
GACACCGGGTTGGGATAACGCAAACGGCGTCACCGGCTGGACGCGTAACTGCAATATTCAAAGTGACAGCGCATTGCAGC
AAGCCTGCGAAGATGTCTTCCGCTTTGATGACGCCAACTAA
ATGGACAAGCAACGCGGTTTTACACTTATTGAACTGATGGTGGTTATTGGCATCATTGCCATTTTAAGCGCCATTGGTAT
TCCCGCTTATCAAAACTACCTGCGCAAAGCCGCACTCACCGACATGCTACAAACCTTTGTGCCTTACCGTACCGCCGTAG
AGTTGTGCGCGCTGGAACATGGTGGATTAAATACCTGCGACGGTGGCAGCAATGGCATTCCTTCGCCTACCACCACCCGC
TATGTTTCAGCCATGAGTGTGGCAAAGGGCGTGGTGTCGCTGACCGGGCAAGAAAGTCTCAATGGGCTAAGCGTCGTCAT
GACACCGGGTTGGGATAACGCAAACGGCGTCACCGGCTGGACGCGTAACTGCAATATTCAAAGTGACAGCGCATTGCAGC
AAGCCTGCGAAGATGTCTTCCGCTTTGATGACGCCAACTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Haemophilus influenzae 86-028NP |
43.089 |
84.247 |
0.363 |