Detailed information    

insolico Bioinformatically predicted

Overview


Name   recX   Type   Regulator
Locus tag   FAH67_RS01630 Genome accession   NZ_CP039886
Coordinates   311597..312058 (-) Length   153 a.a.
NCBI ID   WP_003682288.1    Uniprot ID   C0EQX4
Organism   Neisseria flavescens strain ATCC 13120     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context


Location: 306597..317058
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FAH67_RS01605 (FAH67_01605) - 306660..307349 (+) 690 WP_232500805.1 toxin-antitoxin system YwqK family antitoxin -
  FAH67_RS01610 (FAH67_01610) - 307397..307957 (-) 561 WP_003682296.1 adenine phosphoribosyltransferase -
  FAH67_RS01615 (FAH67_01615) gmk 308126..308743 (+) 618 WP_003682295.1 guanylate kinase -
  FAH67_RS01620 (FAH67_01620) rpoZ 308796..309002 (+) 207 WP_003682294.1 DNA-directed RNA polymerase subunit omega -
  FAH67_RS01625 (FAH67_01625) - 309107..311263 (+) 2157 WP_115287602.1 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase -
  FAH67_RS11465 - 311360..311521 (-) 162 WP_003682290.1 hypothetical protein -
  FAH67_RS01630 (FAH67_01630) recX 311597..312058 (-) 462 WP_003682288.1 recombination regulator RecX Regulator
  FAH67_RS01635 (FAH67_01635) - 312158..312871 (-) 714 WP_003682286.1 phosphoglycolate phosphatase -
  FAH67_RS01640 (FAH67_01640) - 313293..314558 (+) 1266 WP_039864365.1 Glu/Leu/Phe/Val dehydrogenase -
  FAH67_RS01645 (FAH67_01645) - 314719..315534 (+) 816 WP_003682282.1 FKBP-type peptidyl-prolyl cis-trans isomerase -
  FAH67_RS01650 (FAH67_01650) purN 315631..316257 (+) 627 WP_039864363.1 phosphoribosylglycinamide formyltransferase -
  FAH67_RS01655 (FAH67_01655) - 316288..316956 (+) 669 WP_003682278.1 membrane protein -

Sequence


Protein


Download         Length: 153 a.a.        Molecular weight: 17933.15 Da        Isoelectric Point: 7.1699

>NTDB_id=360885 FAH67_RS01630 WP_003682288.1 311597..312058(-) (recX) [Neisseria flavescens strain ATCC 13120]
MKPPKTLRARALDILSRQEVSRVGLKRKLAPHAESEEELEKVLDEFAERNWQSDQRYAEAYIHSKSNRYGTLRLKQALAQ
QGIDADDCREFLPDREDELQTAISVLRKKFKQEAQDLKEKQKQVRFLAYRGFGADTIQTALKTAWNEDEDFYQ

Nucleotide


Download         Length: 462 bp        

>NTDB_id=360885 FAH67_RS01630 WP_003682288.1 311597..312058(-) (recX) [Neisseria flavescens strain ATCC 13120]
ATGAAACCTCCCAAAACCTTACGCGCCCGCGCCTTGGATATTCTTTCCCGTCAGGAAGTCAGCCGTGTCGGCTTGAAACG
CAAACTGGCCCCACACGCTGAAAGCGAAGAAGAATTGGAAAAGGTTTTGGACGAATTTGCCGAACGGAATTGGCAATCCG
ACCAACGTTACGCAGAAGCCTATATTCACAGCAAGAGCAACCGTTACGGCACGCTCCGCCTCAAGCAAGCCTTGGCGCAA
CAAGGTATCGATGCTGATGACTGTCGGGAGTTTCTACCCGATAGGGAGGACGAGCTGCAAACCGCCATTTCCGTCCTGCG
TAAAAAATTCAAGCAAGAAGCTCAAGATTTGAAAGAAAAACAAAAACAGGTGCGTTTCCTTGCCTATCGCGGCTTTGGTG
CCGACACCATTCAGACGGCCTTAAAAACCGCGTGGAATGAAGACGAAGACTTCTATCAATAA

Domains


Predicted by InterproScan.

(30-143)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB C0EQX4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

77.703

96.732

0.752


Multiple sequence alignment