Detailed information NTG0360724

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: GUU84_RS21085
• Genome accession: NZ_CP047662
• Coordinates: 4434937..4435920 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain LD93-1
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 4429937..4440920

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GUU84_RS21060 (GUU84_21060)	bcsF	4430099..4430290 (+)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-
GUU84_RS21065 (GUU84_21065)	bcsG	4430287..4431965 (+)	1679	Protein_4168	cellulose biosynthesis protein BcsG	-
GUU84_RS21070 (GUU84_21070)	ldrD	4432052..4432159 (-)	108	WP_000141634.1	type I toxin-antitoxin system toxic polypeptide LdrD	-
GUU84_RS21075 (GUU84_21075)	yhjV	4432635..4433906 (+)	1272	WP_001295225.1	aromatic amino acid transport family protein	-
GUU84_RS21080 (GUU84_21080)	dppF	4433936..4434940 (-)	1005	WP_000107012.1	dipeptide ABC transporter ATP-binding subunit DppF	-
GUU84_RS21085 (GUU84_21085)	amiE	4434937..4435920 (-)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
GUU84_RS21090 (GUU84_21090)	dppC	4435931..4436833 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
GUU84_RS21095 (GUU84_21095)	dppB	4436843..4437862 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
GUU84_RS24055	-	4438026..4438136 (+)	111	Protein_4175	hypothetical protein	-
GUU84_RS21105 (GUU84_21105)	dppA	4438170..4439777 (-)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=360724 GUU84_RS21085 WP_001196486.1 4434937..4435920(-) (amiE) [Escherichia coli strain LD93-1]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=360724 GUU84_RS21085 WP_001196486.1 4434937..4435920(-) (amiE) [Escherichia coli strain LD93-1]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404