Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   I33_RS19855 Genome accession   NC_017195
Coordinates   4001908..4002747 (-) Length   279 a.a.
NCBI ID   WP_014478573.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis str. RO-NN-1     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3996908..4007747
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I33_RS19835 (I33_4262) yyaE 3997412..3999415 (-) 2004 WP_014478572.1 molybdopterin-dependent oxidoreductase -
  I33_RS19840 (I33_4263) yyzM 3999466..3999672 (-) 207 WP_003226838.1 DUF951 family protein -
  I33_RS19845 (I33_4264) - 3999766..4000782 (-) 1017 WP_010886647.1 membrane protein -
  I33_RS19850 (I33_4265) yyaC 4001243..4001860 (+) 618 WP_003226834.1 spore protease YyaC -
  I33_RS19855 (I33_4266) spo0J 4001908..4002747 (-) 840 WP_014478573.1 stage 0 sporulation protein Spo0J Regulator
  I33_RS19860 (I33_4267) soj 4002740..4003501 (-) 762 WP_003219244.1 sporulation initiation inhibitor protein Soj -
  I33_RS19865 (I33_4268) yyaB 4003749..4004189 (+) 441 WP_014478574.1 PH domain-containing protein -
  I33_RS19870 (I33_4269) noc 4004240..4005091 (-) 852 WP_003226829.1 nucleoid occlusion protein -
  I33_RS19875 (I33_4270) rsmG 4005213..4005932 (-) 720 WP_014478575.1 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG -

Sequence

Protein


Download         Length: 279 a.a.        Molecular weight: 31837.78 Da        Isoelectric Point: 8.3882

>NTDB_id=36057 I33_RS19855 WP_014478573.1 4001908..4002747(-) (spo0J) [Bacillus subtilis subsp. subtilis str. RO-NN-1]
MAKGLGKGINALFNQVDLSEETVEEIKIADLRPNPYQPRKHFDDEALAELKESVLQHGILQPLIVRKSLKGYDIVAGERR
FRAAKLAGLDTVPAIVRELSEALMREIALLENLQREDLSPLEEAQAYDSLLKHLDLTQEQLAKRLGKSRPHIANHLRLLT
LPENIQQLIAEGTLSMGHGRTLLGLKNKNKLEPLVQKVIAEQLNVRQLEQLIQQLNQNVPRETKKKEPVKDAVLKERESY
LQNYFGTTVNIKRQKKKGKIEIEFFSNEDLDRILELLSE

Nucleotide


Download         Length: 840 bp        

>NTDB_id=36057 I33_RS19855 WP_014478573.1 4001908..4002747(-) (spo0J) [Bacillus subtilis subsp. subtilis str. RO-NN-1]
ATGGCTAAAGGCCTTGGAAAAGGGATTAATGCGTTATTTAATCAGGTAGATTTGTCTGAAGAGACAGTTGAAGAAATTAA
AATTGCCGATTTACGCCCTAATCCTTATCAGCCAAGAAAACACTTTGATGACGAGGCATTAGCTGAACTAAAAGAATCTG
TGCTGCAGCATGGCATTCTTCAGCCGCTTATCGTCAGAAAATCTTTAAAAGGCTATGATATTGTTGCGGGTGAACGGCGT
TTTCGAGCGGCAAAGCTGGCAGGTTTAGATACAGTTCCGGCCATTGTCCGTGAATTATCAGAGGCGTTAATGAGGGAAAT
TGCTTTATTAGAAAACCTTCAGCGTGAAGATTTATCTCCGCTTGAAGAGGCTCAGGCATATGACTCCTTGTTGAAACACT
TAGATCTCACACAAGAGCAGCTTGCCAAACGTCTTGGGAAAAGCAGACCGCATATTGCGAATCATTTAAGACTGCTGACA
CTGCCAGAAAATATTCAGCAGCTTATTGCCGAAGGTACGCTTTCTATGGGACATGGACGCACGCTTCTTGGCTTAAAAAA
CAAAAATAAGCTTGAACCGCTGGTACAAAAAGTGATTGCGGAGCAGCTCAATGTTCGCCAGCTTGAGCAGCTGATTCAGC
AGTTGAATCAGAATGTTCCACGTGAAACAAAGAAAAAAGAACCTGTGAAAGATGCGGTTCTAAAAGAACGAGAATCCTAT
CTCCAAAATTATTTTGGAACAACAGTTAATATTAAAAGACAGAAGAAAAAAGGCAAAATCGAAATTGAATTTTTCTCTAA
TGAAGACCTTGACCGGATTTTAGAGCTTTTGTCTGAATGA

Domains

Predicted by InterProScan.

HTH domain found in ParB protein (HTH_ParB)

(163-214)

ParB/Sulfiredoxin domain (ParB_N)

(24-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

41.923

93.19

0.391

Multiple sequence alignment