Detailed information NTG0360539

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: FAZ30_RS07135
• Genome accession: NZ_CP039731
• Coordinates: 1550255..1551373 (-)
• Length: 372 a.a.
• NCBI ID: WP_124645114.1
• Uniprot ID: -
• Organism: Aquitalea aquatilis strain THG-DN7.12
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1545255..1556373

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FAZ30_RS07115	-	1545663..1547450 (+)	1788	WP_124645116.1	Wzy polymerase domain-containing protein	-
FAZ30_RS07120	rpoH	1547519..1548382 (-)	864	WP_103524438.1	RNA polymerase sigma factor RpoH	-
FAZ30_RS07125	ftsX	1548584..1549492 (-)	909	WP_124645115.1	permease-like cell division protein FtsX	-
FAZ30_RS07130	ftsE	1549489..1550142 (-)	654	WP_103524468.1	cell division ATP-binding protein FtsE	-
FAZ30_RS07135	pilA	1550255..1551373 (-)	1119	WP_124645114.1	signal recognition particle-docking protein FtsY	Machinery gene
FAZ30_RS07140	rsmD	1552078..1552638 (+)	561	WP_124645113.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
FAZ30_RS07145	-	1552738..1552989 (+)	252	WP_124645112.1	YfhL family 4Fe-4S dicluster ferredoxin	-
FAZ30_RS07165	tuf	1553477..1554667 (+)	1191	WP_137009171.1	elongation factor Tu	-
FAZ30_RS07175	secE	1554824..1555180 (+)	357	WP_124645614.1	preprotein translocase subunit SecE	-
FAZ30_RS07180	nusG	1555180..1555713 (+)	534	WP_059287633.1	transcription termination/antitermination protein NusG	-
FAZ30_RS07185	rplK	1555812..1556243 (+)	432	WP_059287632.1	50S ribosomal protein L11	-

Sequence

Protein

• Length: 372 a.a.
• Molecular weight: 39539.65 Da
• Isoelectric Point: 6.5148

>NTDB_id=360539 FAZ30_RS07135 WP_124645114.1 1550255..1551373(-) (pilA) [Aquitalea aquatilis strain THG-DN7.12]
MFSFFKKKPKPVETPAAEPLASQPADIPAAAPATLQATPLATPDIPEAPVPAPENPTPPPVSAAAEPPARKQSWTERLKT
GLSKTRDKLGKSLAGLFGGGKIDEELYEELETVLLTADMGMDATVHLLQDVRERVSLKGLKDGSELKGALKDSLNDLIHP
LEKPLDVSGKKPFVIMMAGVNGAGKTTSIGKLAKYYQQQGKSVLLAAGDTFRAAAREQLMAWGERNNVTVIAQQGGDAAA
VCFDAIQAATARGIDIVLADTAGRLPTQLHLMEEIKKVKRVIQKALPDAPHEIILVLDANIGQNAISQVKVFDDALGLTG
LILTKLDGTAKGGVIAAIAKQRPIPLRFVGVGESIDDLRPFNSKDYVDALFD

Nucleotide

• Length: 1119 bp

>NTDB_id=360539 FAZ30_RS07135 WP_124645114.1 1550255..1551373(-) (pilA) [Aquitalea aquatilis strain THG-DN7.12]
ATGTTCAGTTTCTTCAAGAAAAAGCCAAAGCCGGTTGAAACCCCGGCTGCAGAACCCCTAGCCAGCCAGCCGGCAGACAT
CCCGGCGGCGGCTCCCGCCACCTTGCAAGCCACACCGCTTGCTACACCCGACATCCCTGAGGCGCCCGTACCCGCGCCGG
AGAACCCGACTCCTCCCCCCGTCAGTGCCGCAGCAGAACCGCCGGCACGCAAGCAGAGCTGGACCGAACGCCTCAAGACT
GGTCTGTCCAAAACCCGTGACAAACTGGGCAAATCGCTGGCTGGCCTGTTTGGCGGTGGCAAGATCGATGAGGAGTTGTA
CGAAGAGCTGGAAACCGTACTACTGACCGCCGACATGGGCATGGATGCCACGGTGCACCTGCTGCAGGATGTGCGCGAGC
GCGTCAGCCTGAAGGGCCTGAAAGACGGCAGTGAGCTGAAAGGCGCACTCAAGGATTCGCTCAATGATCTGATCCACCCG
CTGGAAAAGCCGCTGGATGTCAGCGGCAAGAAGCCTTTTGTCATCATGATGGCTGGGGTGAATGGTGCCGGGAAAACCAC
CTCGATTGGCAAGCTGGCCAAGTACTATCAGCAGCAAGGCAAGAGCGTGCTGCTGGCTGCTGGCGATACCTTCCGCGCAG
CTGCGCGCGAACAGCTGATGGCCTGGGGCGAACGTAACAATGTCACCGTAATTGCCCAGCAAGGTGGCGACGCTGCTGCC
GTGTGCTTTGATGCCATCCAGGCGGCTACCGCCCGTGGCATCGACATCGTACTGGCGGATACGGCGGGGCGCCTGCCGAC
CCAGCTGCATCTGATGGAAGAAATCAAAAAGGTAAAGCGCGTCATCCAGAAAGCGCTGCCGGATGCGCCACATGAAATCA
TCCTGGTGCTGGATGCCAACATCGGCCAGAACGCCATCAGCCAGGTCAAGGTATTCGATGACGCCCTGGGCCTGACCGGG
CTGATTCTGACCAAGCTGGATGGCACCGCCAAGGGTGGTGTGATTGCCGCCATTGCCAAGCAGCGGCCGATTCCGCTACG
GTTTGTCGGTGTGGGCGAAAGCATCGACGATCTGCGCCCGTTCAACAGCAAGGATTATGTCGACGCCCTGTTCGACTGA

Domains

Predicted by InterproScan.

• SRP54-type protein, helical bundle domain (SRP54_N) (87-154)

• SRP54-type protein, GTPase domain (SRP54) (172-371)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	61.244	100	0.688