Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   GQ601_RS03980 Genome accession   NZ_CP047646
Coordinates   850001..850675 (-) Length   224 a.a.
NCBI ID   WP_001166506.1    Uniprot ID   -
Organism   Staphylococcus aureus strain 19/Msa0875     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 845001..855675
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GQ601_RS03965 (GQ601_04005) - 846181..848070 (-) 1890 WP_000009400.1 ABC transporter permease -
  GQ601_RS03970 (GQ601_04010) vraF 848060..848821 (-) 762 WP_000153733.1 ABC transporter ATP-binding protein VraF -
  GQ601_RS03975 (GQ601_04015) graS 848968..850008 (-) 1041 WP_001061267.1 histidine kinase GraS/ApsS -
  GQ601_RS03980 (GQ601_04020) braR 850001..850675 (-) 675 WP_001166506.1 response regulator transcription factor GraR/ApsR Regulator
  GQ601_RS03985 (GQ601_04025) graX 850691..851614 (-) 924 WP_000802948.1 auxiliary protein GraX/ApsX -
  GQ601_RS03990 (GQ601_04030) - 851727..852233 (+) 507 WP_000940129.1 GNAT family N-acetyltransferase -
  GQ601_RS03995 (GQ601_04035) - 852441..852869 (-) 429 WP_000198503.1 hypothetical protein -
  GQ601_RS04000 (GQ601_04040) - 853199..854242 (-) 1044 WP_001030759.1 alpha/beta hydrolase -
  GQ601_RS04005 (GQ601_04045) - 854393..855460 (-) 1068 WP_000980142.1 membrane protein -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 26062.92 Da        Isoelectric Point: 4.4019

>NTDB_id=360522 GQ601_RS03980 WP_001166506.1 850001..850675(-) (braR) [Staphylococcus aureus strain 19/Msa0875]
MQILLVEDDNTLFQELKKELEQWDFNVAGIEDFGKVMDTFESFNPEIVILDVQLPKYDGFYWCRKMREVSNVPILFLSSR
DNPMDQVMSMELGADDYMQKPFYTNVLIAKLQAIYRRVYEFTAEEKRTLTWQDAVVDLSKDSIQKGEQTIFLSKTEMIIL
EILITKKNQIVSRDTIITALWDDEAFVSDNTLTVNVNRLRKKLSEIGMDSAIETKVGKGYMAHE

Nucleotide


Download         Length: 675 bp        

>NTDB_id=360522 GQ601_RS03980 WP_001166506.1 850001..850675(-) (braR) [Staphylococcus aureus strain 19/Msa0875]
ATGCAAATACTACTAGTAGAAGATGACAATACTTTGTTTCAAGAATTGAAAAAAGAATTAGAACAATGGGATTTTAATGT
TGCTGGTATTGAAGATTTCGGCAAAGTAATGGATACATTTGAAAGTTTTAATCCTGAAATTGTTATATTGGATGTTCAAT
TACCTAAATATGATGGGTTTTATTGGTGCAGAAAAATGAGAGAAGTTTCCAACGTACCAATATTATTTTTATCATCTCGT
GATAATCCAATGGATCAAGTGATGAGTATGGAACTTGGCGCAGATGATTATATGCAAAAGCCTTTTTATACAAATGTATT
AATTGCTAAATTACAAGCGATTTATCGACGAGTGTATGAATTTACTGCTGAAGAAAAACGTACATTGACTTGGCAAGATG
CTGTCGTTGATCTATCAAAAGATAGTATACAAAAAGGTGAACAGACGATTTTTCTATCCAAAACAGAAATGATTATATTA
GAAATTCTTATTACTAAAAAAAATCAAATCGTTTCGAGAGATACAATTATTACTGCGCTATGGGATGATGAAGCATTTGT
CAGTGATAACACATTAACAGTTAATGTGAACCGATTACGTAAGAAACTATCTGAAATAGGGATGGACAGCGCAATTGAAA
CAAAAGTAGGAAAAGGATATATGGCACATGAATAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(148-221)

Response regulator receiver domain (Response_reg)

(3-111)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

41.818

98.214

0.411

Multiple sequence alignment