Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   FAY30_RS06360 Genome accession   NZ_CP039727
Coordinates   1349862..1350671 (+) Length   269 a.a.
NCBI ID   WP_149869097.1    Uniprot ID   -
Organism   Bacillus sp. S3     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 1344862..1355671
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FAY30_RS06335 (FAY30_06335) - 1345976..1346974 (+) 999 WP_149869092.1 homoserine dehydrogenase -
  FAY30_RS06340 (FAY30_06340) - 1347130..1348425 (+) 1296 WP_149869093.1 glycosyltransferase family 2 protein -
  FAY30_RS06345 (FAY30_06345) - 1348445..1349128 (+) 684 WP_149869094.1 glycosyltransferase -
  FAY30_RS06350 (FAY30_06350) - 1349265..1349450 (-) 186 WP_149869095.1 YfhD family protein -
  FAY30_RS06355 (FAY30_06355) - 1349558..1349692 (-) 135 WP_149869096.1 YfhE family protein -
  FAY30_RS06360 (FAY30_06360) recX 1349862..1350671 (+) 810 WP_149869097.1 recombination regulator RecX Regulator
  FAY30_RS06365 (FAY30_06365) - 1350680..1351357 (-) 678 WP_149869098.1 SDR family NAD(P)-dependent oxidoreductase -
  FAY30_RS06370 (FAY30_06370) - 1351446..1351769 (+) 324 WP_149869099.1 YfhH family protein -
  FAY30_RS06375 (FAY30_06375) - 1351982..1352152 (-) 171 WP_149869100.1 small, acid-soluble spore protein K -
  FAY30_RS06380 (FAY30_06380) - 1352299..1353279 (-) 981 WP_149869101.1 metal-dependent hydrolase -
  FAY30_RS06385 (FAY30_06385) mutY 1353420..1354511 (+) 1092 WP_149869102.1 A/G-specific adenine glycosylase -
  FAY30_RS06390 (FAY30_06390) - 1354558..1354740 (-) 183 WP_149869103.1 hypothetical protein -
  FAY30_RS06395 (FAY30_06395) fabL 1354855..1355604 (+) 750 WP_149869104.1 enoyl-[acyl-carrier-protein] reductase FabL -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 31747.39 Da        Isoelectric Point: 7.2052

>NTDB_id=360444 FAY30_RS06360 WP_149869097.1 1349862..1350671(+) (recX) [Bacillus sp. S3]
MAIITKITTQQKNQDRFNVFMDYGKGEEYAFSIDSDVLIKYQLKKGMELDDFSFLEIQYQDDIRKAYNLAVNYLARRMRS
EKEINDYLLKKEMDEPIIKEVIHKLTAQKYINDEEFAIAYVRTQVNTTDKGPSVIKMELKEKGIKESTLLQVLEEFPLNQ
QIEKATKIAEKFFQKNTKESSKIQKQKLENVLMRKGYSFEVIAIAVNETEVSKEADEEMDAIRFQGEKAHRKLSKFNGYE
YRQKMKQALYRKGFSIDLIERFLAEREDS

Nucleotide


Download         Length: 810 bp        

>NTDB_id=360444 FAY30_RS06360 WP_149869097.1 1349862..1350671(+) (recX) [Bacillus sp. S3]
ATGGCCATTATTACAAAAATCACCACACAGCAGAAAAATCAAGATCGGTTTAATGTGTTTATGGATTATGGTAAAGGTGA
AGAATATGCTTTTAGTATTGACAGCGACGTATTAATTAAATACCAATTAAAAAAAGGGATGGAGCTTGATGATTTCTCTT
TCTTGGAAATTCAATACCAGGATGACATTCGTAAAGCGTACAACCTTGCAGTTAATTATTTGGCTAGAAGGATGAGATCT
GAAAAAGAAATCAACGATTATCTTCTAAAAAAAGAAATGGATGAGCCCATCATCAAAGAGGTGATCCATAAATTAACCGC
TCAGAAATACATAAATGACGAGGAATTTGCTATAGCTTACGTGAGGACACAGGTCAATACAACAGATAAAGGGCCCAGTG
TAATCAAGATGGAATTAAAGGAAAAGGGAATTAAGGAGTCAACCCTCCTACAAGTTCTAGAAGAATTTCCTTTAAACCAG
CAGATTGAAAAAGCCACTAAAATAGCTGAAAAGTTTTTTCAGAAGAATACAAAGGAATCAAGCAAAATTCAAAAACAAAA
GCTGGAAAATGTCCTGATGAGAAAAGGATATTCCTTTGAAGTCATCGCAATTGCAGTTAATGAAACAGAAGTCTCTAAAG
AGGCTGATGAGGAAATGGATGCCATTCGATTCCAAGGCGAAAAGGCGCATCGGAAATTGTCAAAGTTCAATGGCTATGAG
TATCGACAAAAGATGAAACAAGCTTTATATCGTAAAGGCTTTTCAATAGATTTAATCGAACGATTCTTAGCGGAAAGAGA
AGACTCATGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(88-208)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

48.689

99.257

0.483

Multiple sequence alignment