Detailed information
Bioinformatically predicted
Overview
| Name | recR | Type | Machinery gene |
| Locus tag | GTW26_RS19335 | Genome accession | NZ_CP047643 |
| Coordinates | 4130136..4130732 (-) | Length | 198 a.a. |
| NCBI ID | WP_003111077.1 | Uniprot ID | Q02K17 |
| Organism | Pseudomonas aeruginosa CI27 | ||
| Function | promote later steps in plasmid transformation (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 4125136..4135732
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GTW26_RS19310 | - | 4125483..4125650 (-) | 168 | Protein_3829 | TetR family transcriptional regulator | - |
| GTW26_RS19315 (GTW26_19285) | - | 4125772..4127355 (+) | 1584 | WP_003121915.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| GTW26_RS19320 (GTW26_19290) | - | 4127352..4128239 (+) | 888 | WP_003087246.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| GTW26_RS19325 (GTW26_19295) | - | 4128313..4128852 (+) | 540 | WP_003111079.1 | CbrC family protein | - |
| GTW26_RS19330 (GTW26_19300) | - | 4128865..4130013 (-) | 1149 | WP_003111078.1 | acyl-CoA dehydrogenase family protein | - |
| GTW26_RS19335 (GTW26_19305) | recR | 4130136..4130732 (-) | 597 | WP_003111077.1 | recombination mediator RecR | Machinery gene |
| GTW26_RS19340 (GTW26_19310) | - | 4130811..4131137 (-) | 327 | WP_003087236.1 | YbaB/EbfC family nucleoid-associated protein | - |
| GTW26_RS19345 (GTW26_19315) | dnaX | 4131183..4133282 (-) | 2100 | WP_031656632.1 | DNA polymerase III subunit gamma/tau | - |
| GTW26_RS19350 (GTW26_19320) | - | 4133319..4134185 (+) | 867 | WP_003140216.1 | ABC transporter substrate-binding protein | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 21201.48 Da Isoelectric Point: 6.3332
>NTDB_id=360435 GTW26_RS19335 WP_003111077.1 4130136..4130732(-) (recR) [Pseudomonas aeruginosa CI27]
MSFSPLIRQLIESLRILPGVGQKSAQRMALMLLERDRSGGLKLAQALTAAMEGVGHCRRCRTLSEEELCPQCADPRRDDS
LLCVVEGPLDVFAVEQTGYRGRYFVLKGHLSPLDGLGPEAIGIPELEARIRDGAFSEVILATNPTVEGEATAHYIAQLLA
GRGLTLSRIAHGVPLGGELELVDGGTLAHALAGRRPIS
MSFSPLIRQLIESLRILPGVGQKSAQRMALMLLERDRSGGLKLAQALTAAMEGVGHCRRCRTLSEEELCPQCADPRRDDS
LLCVVEGPLDVFAVEQTGYRGRYFVLKGHLSPLDGLGPEAIGIPELEARIRDGAFSEVILATNPTVEGEATAHYIAQLLA
GRGLTLSRIAHGVPLGGELELVDGGTLAHALAGRRPIS
Nucleotide
Download Length: 597 bp
>NTDB_id=360435 GTW26_RS19335 WP_003111077.1 4130136..4130732(-) (recR) [Pseudomonas aeruginosa CI27]
ATGAGTTTCAGCCCGCTGATCCGCCAACTGATCGAGTCCCTGCGCATTCTTCCCGGTGTCGGGCAGAAGTCGGCCCAGCG
CATGGCGCTGATGCTGCTGGAGCGCGATCGCAGCGGCGGCCTGAAGCTGGCCCAGGCGTTGACCGCCGCGATGGAAGGGG
TCGGTCATTGCCGGCGGTGCCGTACCCTCAGCGAGGAGGAGCTGTGCCCGCAGTGCGCCGACCCGCGACGCGACGACTCG
CTGCTCTGCGTGGTGGAAGGCCCTCTGGACGTATTCGCGGTGGAGCAGACCGGCTACCGCGGCCGCTATTTCGTGCTCAA
GGGACACCTGTCGCCGCTCGACGGCCTGGGGCCGGAGGCGATCGGCATTCCCGAACTGGAAGCGCGGATCAGGGACGGAG
CCTTCAGCGAGGTGATCCTCGCCACCAACCCCACCGTGGAAGGCGAGGCCACCGCCCACTATATCGCCCAGCTACTGGCC
GGCCGCGGCCTGACCTTGTCGCGTATCGCCCATGGCGTGCCGCTGGGTGGCGAGCTGGAGCTGGTCGATGGCGGCACCTT
GGCCCACGCCCTGGCCGGACGGCGGCCGATCTCCTGA
ATGAGTTTCAGCCCGCTGATCCGCCAACTGATCGAGTCCCTGCGCATTCTTCCCGGTGTCGGGCAGAAGTCGGCCCAGCG
CATGGCGCTGATGCTGCTGGAGCGCGATCGCAGCGGCGGCCTGAAGCTGGCCCAGGCGTTGACCGCCGCGATGGAAGGGG
TCGGTCATTGCCGGCGGTGCCGTACCCTCAGCGAGGAGGAGCTGTGCCCGCAGTGCGCCGACCCGCGACGCGACGACTCG
CTGCTCTGCGTGGTGGAAGGCCCTCTGGACGTATTCGCGGTGGAGCAGACCGGCTACCGCGGCCGCTATTTCGTGCTCAA
GGGACACCTGTCGCCGCTCGACGGCCTGGGGCCGGAGGCGATCGGCATTCCCGAACTGGAAGCGCGGATCAGGGACGGAG
CCTTCAGCGAGGTGATCCTCGCCACCAACCCCACCGTGGAAGGCGAGGCCACCGCCCACTATATCGCCCAGCTACTGGCC
GGCCGCGGCCTGACCTTGTCGCGTATCGCCCATGGCGTGCCGCTGGGTGGCGAGCTGGAGCTGGTCGATGGCGGCACCTT
GGCCCACGCCCTGGCCGGACGGCGGCCGATCTCCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recR | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
48.241 |
100 |
0.485 |
| recR | Bacillus subtilis subsp. subtilis str. 168 |
48.469 |
98.99 |
0.48 |