Detailed information NTG0360411

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: FBF59_RS20000
• Genome accession: NZ_CP039721
• Coordinates: 3873605..3874732 (-)
• Length: 375 a.a.
• NCBI ID: WP_000470754.1
• Uniprot ID: A0A9W3P6A6
• Organism: Bacillus thuringiensis strain BT-59
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3868605..3879732

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FBF59_RS19990 (FBF59_19990)	gyrA	3869083..3871554 (-)	2472	WP_001282868.1	DNA gyrase subunit A	-
FBF59_RS19995 (FBF59_19995)	gyrB	3871643..3873565 (-)	1923	WP_000435979.1	DNA topoisomerase (ATP-hydrolyzing) subunit B	-
FBF59_RS20000 (FBF59_20000)	recF	3873605..3874732 (-)	1128	WP_000470754.1	DNA replication/repair protein RecF	Machinery gene
FBF59_RS20005 (FBF59_20005)	yaaA	3874745..3874957 (-)	213	WP_000680510.1	S4 domain-containing protein YaaA	-
FBF59_RS20010 (FBF59_20010)	dnaN	3875085..3876230 (-)	1146	WP_001212884.1	DNA polymerase III subunit beta	-
FBF59_RS20015 (FBF59_20015)	dnaA	3876409..3877749 (-)	1341	WP_000428018.1	chromosomal replication initiator protein DnaA	-
FBF59_RS20020 (FBF59_20020)	rpmH	3878314..3878448 (+)	135	WP_000831901.1	50S ribosomal protein L34	-
FBF59_RS20025 (FBF59_20025)	rnpA	3878525..3878872 (+)	348	WP_000726621.1	ribonuclease P protein component	-
FBF59_RS20030 (FBF59_20030)	spoIIIJ	3878925..3879692 (+)	768	WP_000727741.1	YidC family membrane integrase SpoIIIJ	-

Sequence

Protein

• Length: 375 a.a.
• Molecular weight: 43318.66 Da
• Isoelectric Point: 6.7809

>NTDB_id=360411 FBF59_RS20000 WP_000470754.1 3873605..3874732(-) (recF) [Bacillus thuringiensis strain BT-59]
MFISEIQLKNYRNYEKLELSFEDKVNVIIGENAQGKTNLMEAIYVLAMAKSHRTSNDRELIRWDEEFGQIKGKLQKRNSS
LSLELNISKKGKKAKLNQLEQQKLSQYIGVMNVVMFAPEDLNLVKGSPQVRRRFLDMELGQIAPIYLYELSQYQKVLTQR
NHLLKKMQGNSKNEETMLDVFTLQLIEHGAKILQKRFEFLHLLQEWAAPIHRGISRGLEELEIVYKPSVDVSESMDLSKI
KEVYYESFQSVKQREIFRGTTLIGPHRDDLQFFVNSKNVQVFGSQGQQRTTALSLKLAEIELIYSEVKEYPILLLDDVLS
ELDDYRQSHLLNTIQGKVQTFVTTTSVDGIEHETLKDAKTIHVTNGTVDCEIDRA

Nucleotide

• Length: 1128 bp

>NTDB_id=360411 FBF59_RS20000 WP_000470754.1 3873605..3874732(-) (recF) [Bacillus thuringiensis strain BT-59]
TTGTTTATTTCAGAAATACAATTAAAAAACTATCGCAATTATGAAAAATTAGAGCTTTCCTTTGAAGATAAGGTAAATGT
AATTATCGGCGAAAATGCACAAGGGAAAACAAACTTGATGGAAGCTATTTATGTTTTAGCGATGGCGAAATCTCATAGAA
CCTCTAATGATCGCGAACTTATCCGCTGGGATGAAGAGTTTGGTCAAATAAAAGGGAAATTACAAAAAAGAAACAGTTCT
TTGTCTTTGGAATTAAATATTTCGAAAAAAGGTAAAAAGGCAAAATTAAATCAACTTGAACAACAAAAGTTAAGTCAATA
TATTGGCGTGATGAACGTTGTCATGTTTGCCCCAGAAGATTTAAATCTTGTAAAAGGAAGCCCTCAAGTAAGAAGACGCT
TTTTAGATATGGAATTAGGACAAATAGCTCCTATATATTTGTATGAATTAAGTCAATATCAAAAGGTGCTCACGCAACGA
AATCACTTGTTGAAAAAAATGCAAGGGAATAGTAAGAATGAGGAAACGATGTTGGATGTATTTACACTTCAACTAATTGA
GCATGGTGCGAAAATACTGCAAAAACGTTTTGAATTTTTGCATTTGCTACAGGAATGGGCAGCTCCAATTCATCGCGGTA
TAAGCCGTGGATTAGAAGAGTTAGAAATTGTCTATAAACCAAGTGTAGATGTATCAGAATCAATGGATTTGTCGAAAATA
AAAGAAGTATACTATGAAAGTTTTCAATCTGTGAAACAACGTGAAATTTTCCGTGGTACGACTTTAATTGGTCCTCATCG
TGATGATTTACAATTCTTCGTTAATAGTAAAAATGTTCAAGTCTTTGGTTCGCAAGGGCAACAACGAACGACCGCACTAT
CCCTAAAATTAGCTGAAATTGAATTAATTTATTCAGAGGTTAAAGAATATCCAATCCTTTTGCTGGATGATGTTTTATCA
GAATTAGACGATTATCGTCAATCACATCTGTTAAATACAATTCAAGGAAAGGTGCAAACATTTGTTACAACGACGAGTGT
CGACGGAATTGAACACGAAACATTAAAAGATGCGAAAACAATTCATGTAACGAACGGCACGGTAGATTGTGAAATAGATA
GGGCATAA

Domains

Predicted by InterproScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (2-348)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Bacillus subtilis subsp. subtilis str. 168	66.033	98.133	0.648