Detailed information NTG0360400

Bioinformatically predicted

Overview

• Name: clpC
• Type: Regulator
• Locus tag: FBF59_RS13855
• Genome accession: NZ_CP039721
• Coordinates: 2694291..2696891 (-)
• Length: 866 a.a.
• NCBI ID: WP_000365378.1
• Uniprot ID: A0A9W3P241
• Organism: Bacillus thuringiensis strain BT-59
• Function: degradation of ComK; degradation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 2689291..2701891

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FBF59_RS13825 (FBF59_13825)	fabF	2689612..2690850 (-)	1239	WP_000412645.1	beta-ketoacyl-ACP synthase II	-
FBF59_RS13830 (FBF59_13830)	fabH	2690882..2691814 (-)	933	WP_001100533.1	beta-ketoacyl-ACP synthase III	-
FBF59_RS13835 (FBF59_13835)	comZ	2692046..2692222 (-)	177	WP_001003335.1	ComZ family protein	Regulator
FBF59_RS13840 (FBF59_13840)	-	2692277..2693149 (-)	873	WP_000486171.1	NAD(P)-dependent oxidoreductase	-
FBF59_RS13845 (FBF59_13845)	-	2693179..2693913 (-)	735	WP_000028706.1	hypothetical protein	-
FBF59_RS13850 (FBF59_13850)	-	2694070..2694252 (+)	183	WP_001211948.1	YjzD family protein	-
FBF59_RS13855 (FBF59_13855)	clpC	2694291..2696891 (-)	2601	WP_000365378.1	ATP-dependent chaperone ClpB	Regulator
FBF59_RS13860 (FBF59_13860)	-	2697103..2697282 (-)	180	WP_000531422.1	YjzC family protein	-
FBF59_RS13865 (FBF59_13865)	-	2697773..2698582 (+)	810	WP_001041241.1	Cof-type HAD-IIB family hydrolase	-
FBF59_RS13870 (FBF59_13870)	-	2698688..2698828 (+)	141	WP_000516816.1	hypothetical protein	-
FBF59_RS13875 (FBF59_13875)	-	2698829..2699026 (+)	198	WP_000527409.1	DUF3813 domain-containing protein	-
FBF59_RS13880 (FBF59_13880)	-	2699052..2699909 (-)	858	WP_000364431.1	YitT family protein	-
FBF59_RS13885 (FBF59_13885)	-	2700010..2700141 (+)	132	WP_001120845.1	DUF3941 domain-containing protein	-
FBF59_RS13890 (FBF59_13890)	prsA	2700271..2701128 (+)	858	WP_001214385.1	peptidylprolyl isomerase PrsA	-
FBF59_RS13895 (FBF59_13895)	-	2701170..2701433 (-)	264	WP_003260911.1	hypothetical protein	-

Sequence

Protein

• Length: 866 a.a.
• Molecular weight: 97512.45 Da
• Isoelectric Point: 5.1561

>NTDB_id=360400 FBF59_RS13855 WP_000365378.1 2694291..2696891(-) (clpC) [Bacillus thuringiensis strain BT-59]
MDLNQMTTKTQEAIMSAQSLAVSHHHQEVDTVHLLFTLLEEQDGLAVRIFQKMNVDIEALKQGAESLIKKKPSVTGSGAE
VGKLYITGALQQLFVRAGKEAEKLQDDYISVEHVLLAFSEEKGDINQLFTRFHITKDNLLQSLMTVRGNQRVTSQNPEAT
YEALEKYGRDLVAEVRAGKIDPVIGRDSEIRRVIRILSRKTKNNPVLIGEPGVGKTAIVEGLAQRIVKKDVPEGLKDRTI
FALDMSALVAGAKFRGEFEERLQAVLNEIKKSEGRILLFIDELHTIVGAGKTEGAMDAGNMLKPMLARGELHCIGATTLD
EYRKYIEKDPALERRFQQVLAEEPTVEDTISILRGLKERFEIYHGVNIHDRAIVAASVLSDRYISDRFLPDKAIDLVDEA
CATIRTEIDSMPTELDEVTRRIMQLEIEEAALGKETDRGSQERLKTLQRELSDLKEVASGMRAKWEKEKEDIHKVRDLRE
HLERLRRELEEAEGNYDLNKAAELRHGKIPAIEKELKEAEEMGAHNKQENRLLREEVSEEEIADIVSRWTGIPVAKLVEG
EREKLLRLEQILSERVIGQEEAVSLVSDAVLRARAGIKDPNRPIGSFIFLGPTGVGKTELAKTLAQSLFDSEEQMIRIDM
SEYMEKHAVSRLIGAPPGYVGYEEGGQLTEAVRRKPYSVILLDEIEKAHPEVFNILLQMLDDGRITDSQGRTVDFKNTVI
IMTSNIGSAHLLDGLEEDGSIKEESRDLVMGQLRGHFRPEFLNRVDEIILFKPLTTNEIKGIVDKIVKELQGRLADRHIT
VELTDAAKEFVVEAGFDPMYGARPLKRYVQRQVETKLARELIAGTITDNSHVVVDVENNELVVHVK

Nucleotide

• Length: 2601 bp

>NTDB_id=360400 FBF59_RS13855 WP_000365378.1 2694291..2696891(-) (clpC) [Bacillus thuringiensis strain BT-59]
ATGGACTTAAATCAAATGACAACAAAAACACAAGAGGCGATTATGAGTGCCCAATCTTTAGCGGTATCTCATCATCATCA
AGAAGTAGATACTGTTCATCTCTTGTTTACATTATTAGAAGAGCAAGATGGGTTAGCAGTGCGTATTTTTCAAAAAATGA
ATGTCGATATAGAAGCGTTAAAGCAAGGCGCCGAAAGTTTAATTAAGAAAAAGCCTTCTGTAACGGGAAGCGGTGCAGAA
GTAGGCAAATTATATATAACAGGTGCTCTGCAACAACTATTTGTAAGAGCAGGAAAAGAAGCAGAGAAATTGCAAGATGA
CTACATTTCAGTGGAACATGTATTGCTTGCTTTTTCTGAAGAAAAAGGCGATATCAATCAATTATTTACAAGATTTCATA
TTACGAAAGATAACTTATTACAGTCTTTAATGACAGTTCGGGGGAATCAAAGAGTGACTAGTCAAAATCCAGAAGCAACT
TATGAAGCGTTAGAAAAATATGGCCGTGATTTAGTGGCAGAAGTGAGAGCAGGGAAAATTGATCCTGTTATTGGCCGGGA
TAGTGAAATTCGACGTGTCATTCGCATTCTTTCACGTAAAACGAAAAACAACCCTGTTTTAATTGGTGAGCCAGGTGTTG
GTAAAACAGCAATCGTTGAAGGGTTAGCGCAGCGTATTGTGAAAAAAGATGTACCTGAAGGGCTAAAAGATAGAACGATC
TTCGCGTTAGATATGAGTGCGCTCGTAGCTGGTGCGAAATTCCGTGGTGAGTTCGAAGAGCGTCTGCAAGCTGTATTAAA
TGAAATTAAAAAGAGTGAAGGGCGTATTTTATTATTTATTGATGAACTTCATACAATCGTTGGCGCCGGTAAAACAGAAG
GTGCGATGGATGCAGGGAATATGTTAAAACCGATGCTTGCTCGCGGTGAACTACACTGTATTGGGGCGACGACATTAGAT
GAATATCGTAAATATATTGAGAAAGACCCGGCGTTAGAAAGACGTTTCCAACAAGTATTAGCAGAAGAACCAACTGTTGA
AGATACAATTTCCATTTTACGTGGTTTAAAAGAGCGTTTTGAAATTTATCATGGTGTAAATATTCATGACCGCGCGATTG
TAGCAGCATCAGTTTTATCAGATCGATATATTTCGGACCGTTTCTTACCAGATAAAGCAATTGATCTTGTCGATGAAGCG
TGTGCAACAATTCGTACAGAAATCGATTCTATGCCGACAGAATTAGATGAAGTAACGCGTCGTATTATGCAGTTAGAAAT
TGAGGAAGCAGCTCTTGGAAAAGAAACAGATCGTGGTAGCCAAGAACGTCTTAAAACGTTGCAACGTGAACTATCAGATT
TAAAAGAAGTTGCAAGTGGTATGAGAGCGAAATGGGAGAAAGAAAAAGAAGACATTCACAAAGTTCGTGACTTACGTGAA
CATTTAGAACGTCTGCGCCGTGAATTAGAAGAAGCAGAAGGTAATTACGATTTAAATAAAGCAGCCGAACTTCGTCACGG
GAAAATTCCAGCAATTGAAAAAGAGTTAAAAGAAGCGGAAGAAATGGGCGCGCATAATAAACAAGAAAATCGTTTATTAC
GTGAGGAAGTAAGTGAAGAAGAAATTGCAGATATTGTTTCACGCTGGACTGGTATTCCTGTTGCTAAACTCGTTGAAGGT
GAACGCGAGAAATTACTACGCTTAGAGCAAATCTTATCAGAGCGTGTCATCGGACAAGAGGAAGCAGTAAGCTTAGTATC
AGACGCGGTTCTTCGTGCTCGCGCCGGTATTAAAGATCCGAACCGCCCGATTGGTTCCTTCATTTTCTTAGGCCCTACGG
GTGTTGGTAAAACAGAACTTGCAAAAACGTTAGCGCAGTCTTTATTCGATAGTGAAGAGCAAATGATTCGTATTGATATG
TCTGAGTATATGGAGAAACACGCAGTGTCACGCTTAATTGGTGCACCTCCTGGATATGTAGGATATGAAGAAGGCGGTCA
ATTAACAGAAGCGGTAAGACGTAAACCATATTCCGTTATTTTATTAGATGAAATTGAAAAAGCACATCCAGAAGTATTCA
ACATTTTATTACAAATGTTAGATGATGGACGCATTACAGATTCGCAAGGACGTACAGTGGACTTTAAAAACACAGTTATT
ATTATGACTTCAAATATTGGATCTGCTCATTTACTAGATGGATTAGAAGAAGATGGCTCGATTAAAGAGGAATCAAGAGA
CCTTGTAATGGGGCAATTAAGAGGACATTTCCGCCCTGAATTTTTAAACCGTGTTGATGAAATTATTTTATTTAAACCTC
TTACAACGAATGAAATTAAAGGTATTGTTGATAAAATTGTAAAAGAATTACAAGGGCGTTTAGCTGACCGTCACATTACA
GTAGAATTAACAGACGCAGCAAAAGAATTTGTTGTAGAAGCTGGCTTTGATCCGATGTATGGAGCTCGTCCATTAAAACG
ATACGTACAACGTCAAGTGGAAACGAAATTAGCGCGAGAATTAATTGCAGGAACAATTACTGACAATAGTCACGTAGTTG
TCGATGTAGAAAATAACGAATTAGTTGTTCATGTGAAATAA

Domains

Predicted by InterproScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (602-768)

• ATPase family associated with various cellular activities (AAA) (AAA) (206-339)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (97-148)

• Clp amino terminal domain, pathogenicity island component (Clp_N) (17-68)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (774-854)

• AAA lid domain (AAA_lid_9) (345-447)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpC	Bacillus subtilis subsp. subtilis str. 168	47.657	100	0.482
clpC	Lactococcus lactis subsp. lactis strain DGCC12653	42.039	100	0.424
clpC	Lactococcus lactis subsp. cremoris KW2	47.199	82.448	0.389