Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   FBF59_RS13735 Genome accession   NZ_CP039721
Coordinates   2673274..2673957 (-) Length   227 a.a.
NCBI ID   WP_000350716.1    Uniprot ID   A0A9W5VN71
Organism   Bacillus thuringiensis strain BT-59     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 2668274..2678957
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FBF59_RS13720 (FBF59_13720) pepF 2668454..2670280 (-) 1827 WP_000003356.1 oligoendopeptidase F Regulator
  FBF59_RS13725 (FBF59_13725) - 2670332..2671576 (-) 1245 WP_000628324.1 competence protein CoiA -
  FBF59_RS13730 (FBF59_13730) - 2671657..2673201 (-) 1545 WP_000799189.1 cardiolipin synthase -
  FBF59_RS13735 (FBF59_13735) mecA 2673274..2673957 (-) 684 WP_000350716.1 adaptor protein MecA Regulator
  FBF59_RS13740 (FBF59_13740) - 2674303..2674977 (+) 675 WP_000362600.1 TerC family protein -
  FBF59_RS13745 (FBF59_13745) spx 2675027..2675422 (-) 396 WP_000258267.1 transcriptional regulator Spx -
  FBF59_RS13755 (FBF59_13755) - 2676014..2676217 (+) 204 WP_000559983.1 hypothetical protein -
  FBF59_RS13760 (FBF59_13760) - 2676245..2677891 (-) 1647 WP_000727253.1 peptide ABC transporter substrate-binding protein -

Sequence


Protein


Download         Length: 227 a.a.        Molecular weight: 27009.07 Da        Isoelectric Point: 3.9986

>NTDB_id=360396 FBF59_RS13735 WP_000350716.1 2673274..2673957(-) (mecA) [Bacillus thuringiensis strain BT-59]
MDIERINDHTMKFFITYIDIEDRGFNREEIWYDRERSEELFWEMMDEARDHDDFFIDGPLWIQVQAVDKGIEVLVTKAEL
SKDGQKLELPIGVDKIIDIPLDEGIESLFQQELVEEVEEQTGTNFNEDGTFGFLIKFNDFEDVISLSHRLIFEDIKDELY
SFENRYYVYVEFDEVLHDEEEIDRILSIILEYGEESTLTIHRVSEYGKQIVKEHALETIRNNFPAKT

Nucleotide


Download         Length: 684 bp        

>NTDB_id=360396 FBF59_RS13735 WP_000350716.1 2673274..2673957(-) (mecA) [Bacillus thuringiensis strain BT-59]
TTGGATATTGAAAGAATTAATGATCATACGATGAAATTTTTTATTACGTACATTGATATAGAGGATAGAGGATTTAATCG
TGAAGAAATTTGGTATGATCGCGAACGAAGTGAAGAGCTCTTTTGGGAGATGATGGACGAAGCTCGTGATCATGACGATT
TCTTTATTGATGGGCCGTTATGGATTCAAGTGCAAGCAGTCGATAAAGGGATTGAAGTACTTGTCACGAAAGCAGAGCTT
TCAAAGGACGGACAAAAGCTGGAACTACCGATAGGGGTAGACAAAATTATAGATATTCCTCTAGATGAAGGCATCGAATC
ATTATTCCAACAAGAGTTAGTCGAAGAGGTAGAAGAACAAACAGGAACAAACTTTAATGAAGATGGTACGTTTGGCTTTT
TAATTAAATTTAATGATTTTGAAGATGTCATTTCATTAAGTCATCGTCTTATCTTTGAAGATATAAAAGATGAGCTGTAT
TCATTTGAGAACCGCTATTATGTATATGTGGAATTCGATGAAGTGCTACATGATGAAGAAGAAATCGATCGTATTTTAAG
TATTATTTTAGAATATGGGGAAGAATCAACTTTAACAATTCATCGTGTAAGTGAGTATGGAAAACAAATTGTGAAAGAGC
ATGCGCTTGAAACGATTCGCAATAATTTTCCTGCTAAAACGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

56.14

100

0.564


Multiple sequence alignment