Detailed information NTG0360347

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: GUK18_RS13510
• Genome accession: NZ_CP047600
• Coordinates: 2792298..2793281 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196477.1
• Uniprot ID: A0A0H2VBW7
• Organism: Escherichia coli O84:H7 strain Trh52
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 2787298..2798281

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GUK18_RS13485 (GUK18_13515)	-	2788448..2788555 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
GUK18_RS13490 (GUK18_13520)	-	2788931..2789038 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
GUK18_RS13495 (GUK18_13525)	-	2789413..2789520 (-)	108	WP_000170745.1	type I toxin-antitoxin system toxin Ldr family protein	-
GUK18_RS13500 (GUK18_13530)	yhjV	2789996..2791267 (+)	1272	WP_014640225.1	aromatic amino acid transport family protein	-
GUK18_RS13505 (GUK18_13535)	dppF	2791297..2792301 (-)	1005	WP_000103579.1	dipeptide ABC transporter ATP-binding subunit DppF	-
GUK18_RS13510 (GUK18_13540)	amiE	2792298..2793281 (-)	984	WP_001196477.1	dipeptide ABC transporter ATP-binding protein	Regulator
GUK18_RS13515 (GUK18_13545)	dppC	2793292..2794194 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
GUK18_RS13520 (GUK18_13550)	dppB	2794204..2795223 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
GUK18_RS13525 (GUK18_13555)	dppA	2795374..2796981 (-)	1608	WP_001222871.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35801.38 Da
• Isoelectric Point: 6.5813

>NTDB_id=360347 GUK18_RS13510 WP_001196477.1 2792298..2793281(-) (amiE) [Escherichia coli O84:H7 strain Trh52]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNLVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=360347 GUK18_RS13510 WP_001196477.1 2792298..2793281(-) (amiE) [Escherichia coli O84:H7 strain Trh52]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGTGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCAATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCAATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCTGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGACCAAAACTGCTGATTGCCGATGAACCGACCACTGCGCTGGACGTGAC
CATCCAGGCGCAAATCATCGAACTGCTGCTGGAGTTGCAGCAGAAAGAGAACATGGCGCTGGTGTTGATCACTCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTAGTAGAAACGGGCGATGCGCACGCT
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

3D structure

• AlphaFold DB: A0A0H2VBW7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404