Detailed information NTG0360289

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: GUU88_RS20820
• Genome accession: NZ_CP047594
• Coordinates: 4291825..4292808 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain LD27-1
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 4286825..4297808

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GUU88_RS20795 (GUU88_20795)	bcsF	4286986..4287177 (+)	192	WP_000988308.1	cellulose biosynthesis protein BcsF	-
GUU88_RS20800 (GUU88_20800)	bcsG	4287174..4288853 (+)	1680	WP_000191622.1	cellulose biosynthesis protein BcsG	-
GUU88_RS20805 (GUU88_20805)	ldrD	4288940..4289047 (-)	108	WP_000141634.1	type I toxin-antitoxin system toxic polypeptide LdrD	-
GUU88_RS20810 (GUU88_20810)	yhjV	4289523..4290794 (+)	1272	WP_001295225.1	aromatic amino acid transport family protein	-
GUU88_RS20815 (GUU88_20815)	dppF	4290824..4291828 (-)	1005	WP_000107012.1	dipeptide ABC transporter ATP-binding subunit DppF	-
GUU88_RS20820 (GUU88_20820)	amiE	4291825..4292808 (-)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
GUU88_RS20825 (GUU88_20825)	dppC	4292819..4293721 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
GUU88_RS20830 (GUU88_20830)	dppB	4293731..4294750 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
GUU88_RS23335	-	4294914..4295024 (+)	111	Protein_4121	hypothetical protein	-
GUU88_RS20835 (GUU88_20835)	dppA	4295058..4296665 (-)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=360289 GUU88_RS20820 WP_001196486.1 4291825..4292808(-) (amiE) [Escherichia coli strain LD27-1]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=360289 GUU88_RS20820 WP_001196486.1 4291825..4292808(-) (amiE) [Escherichia coli strain LD27-1]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404