Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrQ   Type   Regulator
Locus tag   FA707_RS02115 Genome accession   NZ_CP039712
Coordinates   436623..438422 (+) Length   599 a.a.
NCBI ID   WP_136952675.1    Uniprot ID   -
Organism   Vagococcus zengguangii strain MN-17     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 431623..443422
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FA707_RS02090 (FA707_02090) - 431817..432134 (+) 318 WP_136952670.1 hypothetical protein -
  FA707_RS02095 (FA707_02095) - 432176..432895 (-) 720 WP_136952671.1 hypothetical protein -
  FA707_RS02100 (FA707_02100) - 432992..434059 (-) 1068 WP_136952672.1 HAMP domain-containing sensor histidine kinase -
  FA707_RS02105 (FA707_02105) - 434059..434730 (-) 672 WP_136952673.1 response regulator transcription factor -
  FA707_RS02110 (FA707_02110) rcrP 434873..436630 (+) 1758 WP_136952674.1 ABC transporter ATP-binding protein Regulator
  FA707_RS02115 (FA707_02115) rcrQ 436623..438422 (+) 1800 WP_136952675.1 ABC transporter ATP-binding protein Regulator
  FA707_RS02120 (FA707_02120) - 438664..441342 (+) 2679 WP_136952676.1 cation-translocating P-type ATPase -
  FA707_RS02125 (FA707_02125) - 441418..442131 (-) 714 WP_136952677.1 MIP/aquaporin family protein -

Sequence

Protein


Download         Length: 599 a.a.        Molecular weight: 66248.52 Da        Isoelectric Point: 4.7700

>NTDB_id=360289 FA707_RS02115 WP_136952675.1 436623..438422(+) (rcrQ) [Vagococcus zengguangii strain MN-17]
MARPMHGGGRPAEKIDASFSDTWGKLINYCKQYMPAISVALIAAIGGAILTLIGPNKLSELTDIITEGMMTEVDMPGIKK
IAMTLLMIYVASVVLSYLQGFIMTTITQRVSKKMRGDIATKINRLPLKYLDQTSYGDTLSRVTNDVDTISQTLNQGIGSL
VAAIAQFLGAIVMMYYTDWRMATVGILSSLLGFVFMITIISKSQGYFAKQQNLLGELNGQIEESYNGHTNIKAYNAQPEF
IQNFTQVNDKLRNSAQMAQFLSGLMMPLMNFIGNIGYVAVCVTGASLVIDGKITIGVIVAFMLYIRLFTQPLSNIAQSMT
SLQSTGAASYRVFGLLEEAEMTDESDLMQHIDNVKGDVTFEHVSFGYDEDKMIIKDFSANVKSGQKIAIVGPTGAGKSTL
VNLLMKFYEVNEGEITIDGYPLSTLSRKAIHDAFCMVLQDTWMFEGTIRENLIYSEEGATEERMREVCKAVGVEHFIKTL
SKGYDTVLDDNTSLSAGQKQLVTIARAMLKDSPMLILDEATSSVDTRTEILIQQAMDKLMEGRTSFVIAHRLSTIKDADL
ILVMKDGQIIEQGNHDELIEQKGFYEELYNSQFTETEMA

Nucleotide


Download         Length: 1800 bp        

>NTDB_id=360289 FA707_RS02115 WP_136952675.1 436623..438422(+) (rcrQ) [Vagococcus zengguangii strain MN-17]
ATGGCTAGACCCATGCATGGTGGCGGAAGACCCGCTGAAAAAATAGACGCTAGTTTCTCCGATACGTGGGGAAAATTAAT
AAATTATTGTAAACAGTATATGCCAGCTATTTCGGTCGCGTTAATTGCGGCAATTGGCGGGGCAATCTTAACATTAATTG
GTCCTAATAAATTAAGTGAATTGACAGACATTATTACTGAAGGCATGATGACCGAGGTTGATATGCCAGGTATTAAAAAA
ATTGCCATGACACTTTTAATGATTTACGTAGCAAGTGTGGTCCTATCTTATCTACAAGGTTTCATTATGACGACTATTAC
GCAACGTGTTTCTAAAAAAATGCGTGGTGATATTGCGACTAAAATCAATCGTTTGCCATTAAAATATTTAGATCAAACAA
GTTATGGAGATACTTTATCCCGTGTAACAAATGATGTGGATACTATTTCCCAAACATTGAACCAAGGGATTGGTTCATTA
GTGGCAGCTATCGCTCAGTTTTTAGGTGCGATAGTGATGATGTATTATACCGATTGGAGAATGGCAACAGTAGGGATTCT
TTCTTCATTACTAGGCTTCGTCTTCATGATTACCATTATTTCTAAATCACAAGGTTATTTTGCCAAACAACAAAATTTAC
TAGGTGAATTAAATGGTCAAATTGAAGAAAGCTACAACGGTCATACTAATATCAAAGCCTACAATGCTCAACCAGAATTT
ATCCAAAACTTCACTCAAGTTAATGACAAGTTACGTAACTCTGCTCAAATGGCACAGTTCTTATCAGGTTTAATGATGCC
ATTAATGAATTTCATTGGAAATATTGGCTATGTAGCAGTCTGTGTAACAGGGGCTAGCTTAGTAATCGATGGTAAAATTA
CTATTGGGGTTATTGTAGCGTTTATGTTATATATTCGCTTGTTTACTCAACCTTTATCAAATATCGCACAATCAATGACA
AGTTTACAATCAACGGGTGCTGCTAGTTACCGTGTCTTCGGCTTATTAGAAGAAGCGGAGATGACAGATGAGTCTGACTT
GATGCAACACATTGATAACGTCAAAGGTGATGTGACGTTTGAACATGTTTCATTTGGTTATGACGAAGATAAAATGATTA
TCAAAGATTTCTCAGCTAATGTTAAATCGGGTCAAAAAATTGCGATAGTAGGGCCAACAGGAGCTGGTAAATCAACACTG
GTTAATTTATTGATGAAATTCTATGAAGTCAATGAGGGTGAAATCACCATTGACGGTTATCCATTATCAACATTATCACG
TAAAGCCATTCATGATGCATTTTGTATGGTACTACAAGATACATGGATGTTTGAAGGAACGATTCGTGAGAATTTGATTT
ACTCAGAAGAAGGCGCGACGGAAGAACGCATGCGTGAAGTATGTAAAGCGGTCGGTGTAGAGCACTTCATCAAAACGTTA
TCGAAAGGTTATGACACAGTCTTAGATGACAATACGTCATTATCAGCGGGTCAAAAACAATTAGTAACGATAGCGCGTGC
GATGTTGAAAGATTCACCAATGTTGATTTTGGATGAAGCAACAAGTTCCGTTGATACACGTACAGAAATCTTAATTCAAC
AAGCCATGGATAAATTAATGGAAGGCCGTACATCGTTTGTTATTGCCCATCGTTTATCAACGATTAAAGATGCCGATTTG
ATTTTAGTCATGAAAGATGGTCAAATCATCGAACAAGGTAATCATGATGAATTGATTGAACAAAAAGGCTTCTATGAAGA
GTTGTATAACAGCCAATTTACCGAAACAGAAATGGCGTAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(39-312)

ABC transporter (ABC_tran)

(375-522)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrQ Streptococcus mutans UA159

56.966

94.658

0.539

Multiple sequence alignment