Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   FA707_RS02110 Genome accession   NZ_CP039712
Coordinates   434873..436630 (+) Length   585 a.a.
NCBI ID   WP_136952674.1    Uniprot ID   A0A4D7CTZ3
Organism   Vagococcus zengguangii strain MN-17     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 429873..441630
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FA707_RS02080 (FA707_02080) - 429950..431071 (+) 1122 WP_168177329.1 ABC transporter permease -
  FA707_RS02085 (FA707_02085) - 431071..431760 (+) 690 WP_136952669.1 ABC transporter ATP-binding protein -
  FA707_RS02090 (FA707_02090) - 431817..432134 (+) 318 WP_136952670.1 hypothetical protein -
  FA707_RS02095 (FA707_02095) - 432176..432895 (-) 720 WP_136952671.1 hypothetical protein -
  FA707_RS02100 (FA707_02100) - 432992..434059 (-) 1068 WP_136952672.1 HAMP domain-containing sensor histidine kinase -
  FA707_RS02105 (FA707_02105) - 434059..434730 (-) 672 WP_136952673.1 response regulator transcription factor -
  FA707_RS02110 (FA707_02110) rcrP 434873..436630 (+) 1758 WP_136952674.1 ABC transporter ATP-binding protein Regulator
  FA707_RS02115 (FA707_02115) rcrQ 436623..438422 (+) 1800 WP_136952675.1 ABC transporter ATP-binding protein Regulator
  FA707_RS02120 (FA707_02120) - 438664..441342 (+) 2679 WP_136952676.1 cation-translocating P-type ATPase -

Sequence

Protein


Download         Length: 585 a.a.        Molecular weight: 65025.70 Da        Isoelectric Point: 5.2042

>NTDB_id=360288 FA707_RS02110 WP_136952674.1 434873..436630(+) (rcrP) [Vagococcus zengguangii strain MN-17]
MFKVLRKFKPAEYLIALISTAFIVAQVWLDLKLPDYMSEITMVMQTPGSKLSDLKEPGMYMVLCALASLVAAIIVGYFAS
KLATNLAHRLRQEVFEKVNAFSMEEMQHFSIASLITRTTNDTSQVQMIIAMGMQVMIKAPIMAVWAISKIAGKNSEWSIA
TAVAVVVLLMLVGSIVVFALPKFKIIQTLTDNLNRVMREGLTGVRVVRAYNAEKYQEDKFEVANEDVTKTNLFVGRMMAL
MMPGMSLIMSGLSLSIYWIGAYLIDAAKAMPERMQLFSDMIVYSSYAMQVVMSFMMLVMIFIMLPRAMVSANRINEVLDT
ETKIIDGTLTQQPWEMGEVEFRNVDFQYPDAEEKVLENISFTASPGETVAFIGSTGSGKSTLINLLARFYDVTAGGILIN
GKNIKEYKLEDLYNKIGYVSQKATIFSGTIESNVAFGDSKSTEPHSVEEALRTAKGLEFVENMEGGIEAKVEQGGSNLSG
GQKQRLAIARAIHKNPEIFIFDDSFSALDYKTDKELRAELDSQRRGATTFIVAQRIGTIRNANKIIVLDEGKIVGMGTHD
ELMENCSVYQEIAYSQLSKEELTNG

Nucleotide


Download         Length: 1758 bp        

>NTDB_id=360288 FA707_RS02110 WP_136952674.1 434873..436630(+) (rcrP) [Vagococcus zengguangii strain MN-17]
ATGTTTAAAGTATTAAGAAAATTTAAACCGGCTGAATATTTAATCGCCTTGATTTCGACAGCCTTTATTGTCGCACAAGT
ATGGTTAGATTTGAAGCTACCTGACTACATGTCAGAAATTACGATGGTGATGCAAACACCAGGAAGTAAATTATCAGATT
TAAAAGAACCAGGAATGTATATGGTGCTATGTGCCCTTGCAAGTTTAGTGGCAGCTATTATCGTTGGTTACTTTGCTTCT
AAGTTAGCTACTAACTTAGCGCATCGTTTACGTCAAGAAGTCTTCGAAAAAGTTAATGCTTTTTCAATGGAAGAGATGCA
ACATTTTTCAATTGCAAGTTTAATCACACGTACGACCAATGATACCAGCCAAGTGCAAATGATTATCGCAATGGGGATGC
AAGTGATGATCAAAGCGCCAATTATGGCGGTTTGGGCAATTAGCAAAATCGCTGGTAAAAACAGTGAGTGGTCAATTGCG
ACAGCGGTAGCCGTAGTGGTGTTATTAATGTTAGTGGGTAGCATTGTCGTCTTTGCTTTACCAAAATTCAAAATTATTCA
AACATTAACAGATAACTTAAACCGTGTCATGCGTGAAGGGCTAACGGGTGTCCGAGTTGTCCGTGCGTATAACGCGGAAA
AATATCAAGAAGATAAATTTGAAGTAGCTAATGAAGACGTAACGAAAACGAACCTGTTCGTTGGTCGTATGATGGCCTTA
ATGATGCCAGGGATGAGCTTAATCATGAGTGGTTTATCATTATCGATTTACTGGATTGGGGCGTACTTAATTGATGCTGC
TAAAGCAATGCCAGAAAGAATGCAGTTGTTCTCAGATATGATTGTATATTCATCTTATGCAATGCAAGTCGTGATGTCAT
TTATGATGTTAGTGATGATTTTCATCATGTTACCACGTGCCATGGTATCGGCTAACCGTATCAATGAAGTACTAGATACA
GAGACTAAAATTATAGATGGTACCTTAACACAACAACCATGGGAAATGGGCGAAGTGGAATTTAGAAACGTTGATTTCCA
ATACCCAGATGCGGAAGAAAAAGTGTTAGAAAACATCTCATTTACTGCTTCACCAGGTGAAACAGTTGCCTTTATTGGTT
CAACTGGTTCAGGTAAGAGTACCTTAATTAATTTATTAGCTCGTTTCTATGATGTAACAGCAGGTGGAATTTTAATTAAT
GGTAAAAACATTAAAGAATATAAATTAGAAGATTTATACAATAAAATTGGATATGTTTCTCAAAAAGCAACGATTTTCTC
AGGTACCATTGAATCTAATGTCGCGTTTGGTGATAGTAAGTCAACTGAACCACATAGTGTTGAGGAAGCTTTACGCACAG
CGAAAGGATTAGAGTTCGTTGAAAACATGGAAGGCGGCATCGAAGCCAAAGTGGAACAAGGGGGTTCAAACCTTTCAGGT
GGTCAAAAACAACGTTTAGCGATTGCTAGAGCGATTCATAAAAACCCGGAAATCTTTATTTTTGATGATTCATTCTCAGC
CTTAGATTACAAAACAGATAAAGAATTACGTGCGGAACTTGATTCACAACGTCGTGGGGCAACAACATTTATCGTGGCAC
AACGTATTGGAACCATCCGTAATGCCAACAAAATTATCGTATTAGATGAGGGCAAAATTGTTGGAATGGGTACTCATGAT
GAATTAATGGAAAACTGTTCAGTGTACCAAGAAATTGCTTACTCACAATTATCGAAGGAGGAATTGACTAATGGCTAG

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(356-504)

ABC transporter transmembrane region (ABC_membrane)

(18-293)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4D7CTZ3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

52.755

100

0.54

Multiple sequence alignment