Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   I33_RS14375 Genome accession   NC_017195
Coordinates   2903965..2904660 (-) Length   231 a.a.
NCBI ID   WP_014477724.1    Uniprot ID   -
Organism   Bacillus subtilis subsp. subtilis str. RO-NN-1     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2898965..2909660
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I33_RS14355 (I33_3092) yttA 2899392..2900138 (+) 747 WP_014477720.1 LMBR1 domain-containing protein -
  I33_RS14360 (I33_3093) bceB 2900175..2902115 (-) 1941 WP_014477721.1 bacitracin ABC transporter permease BceB -
  I33_RS14365 (I33_3094) bceA 2902105..2902866 (-) 762 WP_014477722.1 bacitracin ABC transporter ATP-binding protein BceA -
  I33_RS14370 (I33_3095) bceS 2902968..2903972 (-) 1005 WP_014477723.1 two-component sensor histidine kinase BceS -
  I33_RS14375 (I33_3096) braR 2903965..2904660 (-) 696 WP_014477724.1 two-component response regulator BceR Regulator
  I33_RS14380 (I33_3097) ytrF 2904757..2906067 (-) 1311 WP_014477725.1 ABC transporter permease YtrF -
  I33_RS14385 (I33_3098) ytrE 2906057..2906752 (-) 696 WP_014477726.1 ABC transporter ATP-binding protein YtrE -
  I33_RS14390 (I33_3099) ytrD 2906767..2907744 (-) 978 WP_014477727.1 ABC transporter permease YtrD -
  I33_RS14395 (I33_3100) ytrC 2907774..2908757 (-) 984 WP_014477728.1 ABC transporter permease YtrC -
  I33_RS14400 (I33_3101) ytrB 2908751..2909629 (-) 879 WP_014477729.1 ABC transporter ATP-binding protein YtrB -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26907.84 Da        Isoelectric Point: 5.6471

>NTDB_id=36027 I33_RS14375 WP_014477724.1 2903965..2904660(-) (braR) [Bacillus subtilis subsp. subtilis str. RO-NN-1]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQNFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRLIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNTEPSTIKTWCGAAVDAEQNLVSNDKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDILQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=36027 I33_RS14375 WP_014477724.1 2903965..2904660(-) (braR) [Bacillus subtilis subsp. subtilis str. RO-NN-1]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGAATTTCAGTCAGGTGCTGCAGGAATTTGCGGCGGTTAATCCTGATTGTGTCATTATTGATGTAC
AGCTTCCTAAATTTGACGGTTTTCATTGGTGCCGGCTGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
AGGGACCATCCTGCTGATATGGTGATGTCTATGCAGCTCGGGGCAGATGACTTTATTCAAAAGCCATTTCATTTTGATGT
GCTGATCGCGAAAATCCAAGCGATGTTCCGGCGGGTACACCATTATAATACGGAGCCGAGTACGATTAAAACGTGGTGCG
GCGCTGCTGTAGATGCGGAGCAGAACCTCGTCAGCAATGACAAAGGATCTGTTGAACTGACCAAAAATGAGATGTTCATT
CTTAAACAATTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATTAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGACATCCTGCAGCTTGGCGCATATATCG
AGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTCTATGATTAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(5-113)

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377

Multiple sequence alignment