Detailed information NTG0360159

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: FAZ90_RS01135
• Genome accession: NZ_CP039700
• Coordinates: 237402..238406 (-)
• Length: 334 a.a.
• NCBI ID: WP_010435348.1
• Uniprot ID: A0AAN0LNA0
• Organism: Vibrio cyclitrophicus strain ECSMB14105
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 232402..243406

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FAZ90_RS01105 (FAZ90_01105)	zapB	232572..232814 (+)	243	WP_010435362.1	cell division protein ZapB	-
FAZ90_RS01110 (FAZ90_01110)	rraA	232921..233439 (-)	519	WP_046209436.1	ribonuclease E activity regulator RraA	-
FAZ90_RS01115 (FAZ90_01115)	-	233513..234430 (-)	918	WP_010435357.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
FAZ90_RS01120 (FAZ90_01120)	hslU	234586..235926 (-)	1341	WP_016767976.1	HslU--HslV peptidase ATPase subunit	-
FAZ90_RS01125 (FAZ90_01125)	hslV	235985..236533 (-)	549	WP_004729692.1	ATP-dependent protease subunit HslV	-
FAZ90_RS01130 (FAZ90_01130)	-	236740..237279 (-)	540	WP_010435351.1	SPOR domain-containing protein	-
FAZ90_RS01135 (FAZ90_01135)	cytR	237402..238406 (-)	1005	WP_010435348.1	DNA-binding transcriptional regulator CytR	Regulator
FAZ90_RS01140 (FAZ90_01140)	priA	238647..240848 (-)	2202	WP_016767977.1	primosomal protein N'	-
FAZ90_RS01145 (FAZ90_01145)	rpmE	241180..241398 (+)	219	WP_004737142.1	50S ribosomal protein L31	-
FAZ90_RS01150 (FAZ90_01150)	-	241730..243019 (+)	1290	WP_016787689.1	malic enzyme-like NAD(P)-binding protein	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36507.05 Da
• Isoelectric Point: 6.4911

>NTDB_id=360159 FAZ90_RS01135 WP_010435348.1 237402..238406(-) (cytR) [Vibrio cyclitrophicus strain ECSMB14105]
MATMKDVAQLAGVSTATVSRALMNPEKVSVSTRKRVEAAVLEAGYSPNTLARNLRRNESKTIITIVPDICDPYFAEIIRG
IEDAAVENDYLVLLGDSGQQKKRESSFVNLVFTKQADGMLLLGTDHPFDVSKPEQKNLPPMVMACEFAPELELPTVHIDN
LTSAFEAVNYLAQLGHKRIAQISGPISATLCKFRQQGYQQALRRAGVSMNPAYSTVGDFTFEAGAQAVRQLLALPEQPTA
IFCHNDAMAIGAIQEAKKLGLRVPQDLSIVGFDDIQFAQYCDPPLTTISQPRYEIGRQAMLMMLDLLKGNDVQAGSRLLE
AKLVVRGSTAPPRI

Nucleotide

• Length: 1005 bp

>NTDB_id=360159 FAZ90_RS01135 WP_010435348.1 237402..238406(-) (cytR) [Vibrio cyclitrophicus strain ECSMB14105]
ATGGCGACAATGAAGGATGTTGCCCAGCTAGCAGGCGTCTCAACAGCAACGGTATCACGTGCATTGATGAACCCTGAAAA
AGTCTCTGTTTCTACTCGTAAGCGAGTCGAAGCGGCAGTGCTAGAAGCTGGATACTCACCCAACACATTAGCTAGAAACT
TACGTCGCAACGAATCAAAAACCATCATCACTATCGTTCCTGATATCTGTGACCCTTATTTTGCTGAAATCATTCGTGGT
ATCGAAGACGCCGCAGTAGAAAATGATTACCTTGTTCTACTGGGTGATAGCGGCCAGCAAAAGAAGCGCGAGTCTTCTTT
TGTTAACTTGGTTTTCACCAAGCAAGCTGACGGTATGCTGCTGCTTGGCACTGACCATCCGTTTGATGTCAGCAAGCCTG
AACAAAAGAATTTACCGCCGATGGTGATGGCATGTGAATTCGCCCCTGAGCTCGAATTACCGACAGTACACATCGATAAC
TTAACCTCTGCATTTGAAGCGGTTAACTACCTAGCCCAATTAGGTCATAAGCGTATCGCTCAAATATCTGGCCCAATATC
AGCGACACTGTGTAAATTCCGCCAACAAGGCTACCAACAAGCATTGCGCCGTGCGGGTGTATCAATGAACCCAGCTTATA
GCACGGTCGGTGACTTTACCTTTGAAGCTGGTGCTCAAGCGGTTCGTCAACTTCTAGCTCTGCCCGAGCAACCTACTGCT
ATTTTCTGTCATAACGATGCAATGGCGATTGGTGCGATTCAAGAAGCGAAGAAGCTAGGTTTACGCGTCCCTCAAGATTT
ATCAATTGTTGGCTTTGATGACATCCAATTCGCTCAATACTGCGATCCACCACTGACAACAATTTCTCAGCCTCGTTACG
AGATTGGACGTCAAGCCATGCTAATGATGCTTGATCTCCTTAAAGGTAACGATGTTCAAGCTGGTTCACGTCTGCTTGAA
GCTAAACTCGTGGTTCGAGGCAGTACTGCACCACCGCGAATTTAA

Domains

Predicted by InterproScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (168-329)

• Bacterial regulatory proteins, lacI family (LacI) (3-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio cholerae C6706	89.759	99.401	0.892
cytR	Vibrio parahaemolyticus RIMD 2210633	87.688	99.701	0.874