Detailed information
Bioinformatically predicted
Overview
| Name | rapC | Type | Regulator |
| Locus tag | I33_RS12495 | Genome accession | NC_017195 |
| Coordinates | 2511797..2512924 (-) | Length | 375 a.a. |
| NCBI ID | WP_014477416.1 | Uniprot ID | - |
| Organism | Bacillus subtilis subsp. subtilis str. RO-NN-1 | ||
| Function | inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2506797..2517924
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I33_RS21360 | - | 2507763..2508140 (-) | 378 | Protein_2498 | TetR/AcrR family transcriptional regulator | - |
| I33_RS12475 (I33_2675) | - | 2508344..2509099 (+) | 756 | WP_014477411.1 | carboxymuconolactone decarboxylase family protein | - |
| I33_RS12480 (I33_2676) | - | 2509223..2509972 (+) | 750 | WP_080009825.1 | aldo/keto reductase | - |
| I33_RS12485 (I33_2677) | - | 2510050..2510454 (+) | 405 | WP_014477413.1 | cupin domain-containing protein | - |
| I33_RS12490 (I33_2678) | - | 2510781..2511134 (+) | 354 | WP_014477414.1 | cyclophilin-like fold protein | - |
| I33_RS21470 (I33_2679) | - | 2511333..2511455 (-) | 123 | WP_014477415.1 | hypothetical protein | - |
| I33_RS12495 (I33_2680) | rapC | 2511797..2512924 (-) | 1128 | WP_014477416.1 | Rap family tetratricopeptide repeat protein | Regulator |
| I33_RS12500 (I33_2682) | phrE | 2513650..2513784 (+) | 135 | WP_014114495.1 | phosphatase RapE inhibitor PhrE | - |
| I33_RS20495 | - | 2513894..2514053 (+) | 160 | Protein_2506 | hypothetical protein | - |
| I33_RS12510 (I33_2684) | - | 2514423..2516033 (+) | 1611 | WP_014477419.1 | T7SS effector LXG polymorphic toxin | - |
| I33_RS12515 (I33_2685) | - | 2516054..2516446 (+) | 393 | WP_014477420.1 | immunity 50 family protein | - |
| I33_RS12520 (I33_2686) | - | 2516456..2516896 (+) | 441 | WP_014477421.1 | SMI1/KNR4 family protein | - |
| I33_RS12525 (I33_2687) | - | 2516969..2517304 (+) | 336 | WP_014477422.1 | hypothetical protein | - |
| I33_RS21365 | - | 2517365..2517580 (+) | 216 | WP_080009826.1 | SMI1/KNR4 family protein | - |
| I33_RS21370 (I33_2688) | - | 2517613..2517804 (+) | 192 | WP_014477423.1 | SMI1/KNR4 family protein | - |
Sequence
Protein
Download Length: 375 a.a. Molecular weight: 44164.33 Da Isoelectric Point: 5.6714
>NTDB_id=36010 I33_RS12495 WP_014477416.1 2511797..2512924(-) (rapC) [Bacillus subtilis subsp. subtilis str. RO-NN-1]
MNPVLSSSEVGVKINEWYKMIRQFSVPDAEILKAEVEQEIQRMEEDEYLLIYFSLMKFRHQLMLDYLEPVTTRIRPTIEE
LLEKIETSNKGISGLLSYYSLFFRGMYEFDKKQYMKAIYYYREAEKQLIHVPDEIERAEFHFKLAEAYYGMKQSHVSMHH
VKQALDIYNQYELYKVRKVQCMFVISGNYTDFKHYEKSQPHLEKALELSRELNNKRLISSALYNLGTNFADSGDYEQAEV
YIKQAVEITEKEKLTNLPHSLFSYAKILFKQGKMNEAIQVSKKGLSAALYQGDELFAKLQGYLKALYVDAVDQQGVNQTI
EYLEKNKNYSYIEDIACETAAAYANSKEFETSYVYHQKMLETQTQIQRGECLYDF
MNPVLSSSEVGVKINEWYKMIRQFSVPDAEILKAEVEQEIQRMEEDEYLLIYFSLMKFRHQLMLDYLEPVTTRIRPTIEE
LLEKIETSNKGISGLLSYYSLFFRGMYEFDKKQYMKAIYYYREAEKQLIHVPDEIERAEFHFKLAEAYYGMKQSHVSMHH
VKQALDIYNQYELYKVRKVQCMFVISGNYTDFKHYEKSQPHLEKALELSRELNNKRLISSALYNLGTNFADSGDYEQAEV
YIKQAVEITEKEKLTNLPHSLFSYAKILFKQGKMNEAIQVSKKGLSAALYQGDELFAKLQGYLKALYVDAVDQQGVNQTI
EYLEKNKNYSYIEDIACETAAAYANSKEFETSYVYHQKMLETQTQIQRGECLYDF
Nucleotide
Download Length: 1128 bp
>NTDB_id=36010 I33_RS12495 WP_014477416.1 2511797..2512924(-) (rapC) [Bacillus subtilis subsp. subtilis str. RO-NN-1]
GTGAATCCGGTTTTATCATCGTCAGAAGTTGGCGTAAAGATCAATGAATGGTATAAAATGATACGTCAATTTAGTGTCCC
GGATGCAGAGATTTTAAAGGCAGAGGTCGAGCAAGAAATCCAACGGATGGAGGAAGATGAGTATTTACTCATTTACTTCT
CCCTAATGAAATTCCGTCATCAGCTCATGTTAGATTATTTGGAACCCGTAACAACACGTATAAGACCAACTATTGAGGAA
CTTCTTGAAAAAATTGAGACTTCAAATAAAGGCATATCTGGCCTGTTATCGTATTATTCTCTATTTTTCAGAGGGATGTA
CGAGTTTGATAAGAAGCAATACATGAAAGCTATCTACTATTATAGAGAAGCCGAAAAGCAGCTTATACATGTCCCAGATG
AGATCGAAAGGGCAGAGTTTCATTTTAAGTTAGCTGAAGCATATTATGGTATGAAGCAAAGTCATGTGTCTATGCATCAC
GTTAAACAAGCATTGGATATTTATAATCAATATGAACTTTATAAGGTGCGAAAAGTTCAATGTATGTTTGTTATCTCAGG
GAATTATACTGATTTTAAACATTACGAAAAAAGTCAGCCGCATCTTGAAAAGGCATTAGAGTTATCTAGGGAATTGAATA
ACAAAAGGTTGATTAGTTCTGCACTATATAATTTAGGCACTAATTTTGCTGACAGTGGTGATTACGAGCAGGCGGAAGTA
TACATAAAGCAAGCAGTGGAGATTACAGAAAAAGAAAAGCTCACAAACTTGCCACATTCTTTATTTTCTTATGCAAAAAT
CCTTTTTAAACAAGGAAAAATGAATGAGGCTATCCAAGTAAGTAAGAAAGGTTTGTCAGCAGCTCTTTATCAAGGTGATG
AGCTTTTCGCAAAATTACAGGGATATTTAAAAGCTCTTTATGTCGATGCAGTGGACCAACAAGGTGTTAATCAAACAATA
GAATACTTAGAAAAAAATAAGAACTATTCATATATTGAAGACATTGCCTGTGAGACCGCAGCTGCTTACGCAAACTCAAA
AGAATTTGAAACATCCTATGTATATCATCAGAAAATGCTTGAGACTCAAACACAAATTCAAAGGGGAGAATGCCTGTATG
ACTTTTAA
GTGAATCCGGTTTTATCATCGTCAGAAGTTGGCGTAAAGATCAATGAATGGTATAAAATGATACGTCAATTTAGTGTCCC
GGATGCAGAGATTTTAAAGGCAGAGGTCGAGCAAGAAATCCAACGGATGGAGGAAGATGAGTATTTACTCATTTACTTCT
CCCTAATGAAATTCCGTCATCAGCTCATGTTAGATTATTTGGAACCCGTAACAACACGTATAAGACCAACTATTGAGGAA
CTTCTTGAAAAAATTGAGACTTCAAATAAAGGCATATCTGGCCTGTTATCGTATTATTCTCTATTTTTCAGAGGGATGTA
CGAGTTTGATAAGAAGCAATACATGAAAGCTATCTACTATTATAGAGAAGCCGAAAAGCAGCTTATACATGTCCCAGATG
AGATCGAAAGGGCAGAGTTTCATTTTAAGTTAGCTGAAGCATATTATGGTATGAAGCAAAGTCATGTGTCTATGCATCAC
GTTAAACAAGCATTGGATATTTATAATCAATATGAACTTTATAAGGTGCGAAAAGTTCAATGTATGTTTGTTATCTCAGG
GAATTATACTGATTTTAAACATTACGAAAAAAGTCAGCCGCATCTTGAAAAGGCATTAGAGTTATCTAGGGAATTGAATA
ACAAAAGGTTGATTAGTTCTGCACTATATAATTTAGGCACTAATTTTGCTGACAGTGGTGATTACGAGCAGGCGGAAGTA
TACATAAAGCAAGCAGTGGAGATTACAGAAAAAGAAAAGCTCACAAACTTGCCACATTCTTTATTTTCTTATGCAAAAAT
CCTTTTTAAACAAGGAAAAATGAATGAGGCTATCCAAGTAAGTAAGAAAGGTTTGTCAGCAGCTCTTTATCAAGGTGATG
AGCTTTTCGCAAAATTACAGGGATATTTAAAAGCTCTTTATGTCGATGCAGTGGACCAACAAGGTGTTAATCAAACAATA
GAATACTTAGAAAAAAATAAGAACTATTCATATATTGAAGACATTGCCTGTGAGACCGCAGCTGCTTACGCAAACTCAAA
AGAATTTGAAACATCCTATGTATATCATCAGAAAATGCTTGAGACTCAAACACAAATTCAAAGGGGAGAATGCCTGTATG
ACTTTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rapC | Bacillus subtilis subsp. subtilis str. 168 |
44.415 |
100 |
0.445 |
| rapF | Bacillus subtilis subsp. subtilis str. 168 |
39.683 |
100 |
0.4 |