Detailed information
Bioinformatically predicted
Overview
| Name | pilA | Type | Machinery gene |
| Locus tag | GTW28_RS08905 | Genome accession | NZ_CP047485 |
| Coordinates | 1684608..1685597 (+) | Length | 329 a.a. |
| NCBI ID | WP_003232026.1 | Uniprot ID | P51835 |
| Organism | Bacillus subtilis strain BJQ0005 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1679608..1690597
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GTW28_RS08890 (GTW28_08890) | acpP | 1679805..1680038 (+) | 234 | WP_003154310.1 | acyl carrier protein | - |
| GTW28_RS08895 (GTW28_08895) | rncS | 1680178..1680927 (+) | 750 | WP_003232030.1 | ribonuclease III | - |
| GTW28_RS08900 (GTW28_08900) | smc | 1681028..1684588 (+) | 3561 | WP_046381017.1 | chromosome segregation protein SMC | - |
| GTW28_RS08905 (GTW28_08905) | pilA | 1684608..1685597 (+) | 990 | WP_003232026.1 | signal recognition particle-docking protein FtsY | Machinery gene |
| GTW28_RS08910 (GTW28_08910) | sivC | 1685633..1686115 (-) | 483 | WP_046381018.1 | Ig-like domain-containing protein | - |
| GTW28_RS08915 (GTW28_08915) | srpM | 1686293..1686625 (+) | 333 | WP_003238590.1 | putative DNA-binding protein | - |
| GTW28_RS08920 (GTW28_08920) | ffh | 1686639..1687979 (+) | 1341 | WP_014479771.1 | signal recognition particle protein | - |
| GTW28_RS08925 (GTW28_08925) | rpsP | 1688085..1688357 (+) | 273 | WP_003220815.1 | 30S ribosomal protein S16 | - |
| GTW28_RS08930 (GTW28_08930) | khpA | 1688357..1688602 (+) | 246 | WP_014476792.1 | KH domain-containing protein | - |
| GTW28_RS08935 (GTW28_08935) | ylqD | 1688724..1689110 (+) | 387 | WP_014476793.1 | YlqD family protein | - |
| GTW28_RS08940 (GTW28_08940) | rimM | 1689115..1689639 (+) | 525 | WP_003232013.1 | ribosome maturation factor RimM | - |
| GTW28_RS08945 (GTW28_08945) | trmD | 1689636..1690367 (+) | 732 | WP_046381019.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
Sequence
Protein
Download Length: 329 a.a. Molecular weight: 36342.52 Da Isoelectric Point: 5.0164
>NTDB_id=359885 GTW28_RS08905 WP_003232026.1 1684608..1685597(+) (pilA) [Bacillus subtilis strain BJQ0005]
MSFFKKLKEKITKQTDSVSEKFKDGLEKTRNSFQNKVNDLVSRYRKVDEDFFEELEEVLISADVGFTTVMELIDELKKEV
KRRNIQDPKEVQSVISEKLVEIYNSGDEQISELNIQDGRLNVILLVGVNGVGKTTTIGKLAHKMKQEGKSVVLAAGDTFR
AGAIEQLEVWGERTGVPVIKQTAGSDPAAVIYDAVHAAKARNADVLICDTAGRLQNKVNLMKELEKVKRVIEREVPEAPH
EVLLALDATTGQNAMAQAKEFSKATNVTGIALTKLDGTAKGGIVLAIRNELHIPVKLVGLGEKVDDLQEFDPESYVYGLF
SDLVEKADD
MSFFKKLKEKITKQTDSVSEKFKDGLEKTRNSFQNKVNDLVSRYRKVDEDFFEELEEVLISADVGFTTVMELIDELKKEV
KRRNIQDPKEVQSVISEKLVEIYNSGDEQISELNIQDGRLNVILLVGVNGVGKTTTIGKLAHKMKQEGKSVVLAAGDTFR
AGAIEQLEVWGERTGVPVIKQTAGSDPAAVIYDAVHAAKARNADVLICDTAGRLQNKVNLMKELEKVKRVIEREVPEAPH
EVLLALDATTGQNAMAQAKEFSKATNVTGIALTKLDGTAKGGIVLAIRNELHIPVKLVGLGEKVDDLQEFDPESYVYGLF
SDLVEKADD
Nucleotide
Download Length: 990 bp
>NTDB_id=359885 GTW28_RS08905 WP_003232026.1 1684608..1685597(+) (pilA) [Bacillus subtilis strain BJQ0005]
ATGAGCTTTTTTAAAAAATTAAAAGAGAAAATCACAAAACAGACAGATTCCGTATCTGAAAAGTTTAAGGACGGCCTTGA
AAAAACAAGAAACTCCTTTCAAAACAAAGTGAATGATCTTGTATCCCGTTACCGTAAAGTGGATGAGGATTTCTTCGAAG
AGCTTGAAGAGGTTCTTATCAGCGCTGATGTCGGTTTTACAACCGTTATGGAATTAATAGATGAGCTGAAAAAAGAAGTC
AAACGCAGAAATATTCAAGATCCAAAGGAAGTCCAGTCAGTGATTTCTGAGAAACTGGTCGAGATTTATAACAGTGGAGA
TGAGCAAATTTCAGAACTGAACATCCAGGATGGGCGTTTAAACGTAATCCTTCTGGTAGGTGTAAACGGCGTCGGGAAAA
CAACAACGATCGGAAAGCTTGCTCATAAAATGAAACAAGAAGGAAAATCTGTCGTACTTGCCGCCGGAGACACTTTTAGA
GCGGGGGCCATTGAACAGCTGGAAGTGTGGGGAGAGCGTACAGGAGTGCCTGTCATTAAGCAGACGGCCGGAAGCGATCC
GGCGGCTGTCATCTACGATGCTGTTCATGCTGCGAAAGCAAGAAATGCCGATGTATTAATTTGTGATACGGCAGGTCGTC
TCCAAAACAAAGTAAATCTCATGAAAGAGCTTGAAAAAGTGAAACGTGTTATCGAAAGAGAAGTTCCTGAAGCTCCGCAT
GAGGTGCTGCTTGCCCTTGATGCCACGACCGGCCAAAATGCAATGGCTCAGGCAAAAGAGTTCTCTAAAGCAACAAATGT
TACCGGCATTGCTTTAACGAAGCTTGACGGTACGGCAAAAGGCGGTATCGTCCTTGCGATTCGCAACGAGCTTCACATCC
CGGTTAAACTAGTCGGTTTAGGAGAAAAAGTTGATGATCTTCAGGAATTTGATCCAGAATCCTATGTGTACGGACTCTTT
TCAGATTTAGTGGAAAAAGCCGACGATTAA
ATGAGCTTTTTTAAAAAATTAAAAGAGAAAATCACAAAACAGACAGATTCCGTATCTGAAAAGTTTAAGGACGGCCTTGA
AAAAACAAGAAACTCCTTTCAAAACAAAGTGAATGATCTTGTATCCCGTTACCGTAAAGTGGATGAGGATTTCTTCGAAG
AGCTTGAAGAGGTTCTTATCAGCGCTGATGTCGGTTTTACAACCGTTATGGAATTAATAGATGAGCTGAAAAAAGAAGTC
AAACGCAGAAATATTCAAGATCCAAAGGAAGTCCAGTCAGTGATTTCTGAGAAACTGGTCGAGATTTATAACAGTGGAGA
TGAGCAAATTTCAGAACTGAACATCCAGGATGGGCGTTTAAACGTAATCCTTCTGGTAGGTGTAAACGGCGTCGGGAAAA
CAACAACGATCGGAAAGCTTGCTCATAAAATGAAACAAGAAGGAAAATCTGTCGTACTTGCCGCCGGAGACACTTTTAGA
GCGGGGGCCATTGAACAGCTGGAAGTGTGGGGAGAGCGTACAGGAGTGCCTGTCATTAAGCAGACGGCCGGAAGCGATCC
GGCGGCTGTCATCTACGATGCTGTTCATGCTGCGAAAGCAAGAAATGCCGATGTATTAATTTGTGATACGGCAGGTCGTC
TCCAAAACAAAGTAAATCTCATGAAAGAGCTTGAAAAAGTGAAACGTGTTATCGAAAGAGAAGTTCCTGAAGCTCCGCAT
GAGGTGCTGCTTGCCCTTGATGCCACGACCGGCCAAAATGCAATGGCTCAGGCAAAAGAGTTCTCTAAAGCAACAAATGT
TACCGGCATTGCTTTAACGAAGCTTGACGGTACGGCAAAAGGCGGTATCGTCCTTGCGATTCGCAACGAGCTTCACATCC
CGGTTAAACTAGTCGGTTTAGGAGAAAAAGTTGATGATCTTCAGGAATTTGATCCAGAATCCTATGTGTACGGACTCTTT
TCAGATTTAGTGGAAAAAGCCGACGATTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilA | Neisseria gonorrhoeae MS11 |
43.709 |
91.793 |
0.401 |