Detailed information
Bioinformatically predicted
Overview
| Name | rapC | Type | Regulator |
| Locus tag | GTW28_RS04125 | Genome accession | NZ_CP047485 |
| Coordinates | 775669..776799 (+) | Length | 376 a.a. |
| NCBI ID | WP_046380838.1 | Uniprot ID | - |
| Organism | Bacillus subtilis strain BJQ0005 | ||
| Function | inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation |
||
Genomic Context
Location: 770669..781799
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GTW28_RS04105 (GTW28_04105) | - | 772141..772479 (+) | 339 | WP_021481280.1 | hypothetical protein | - |
| GTW28_RS04110 (GTW28_04110) | - | 772492..773412 (+) | 921 | WP_046380836.1 | DUF5655 domain-containing protein | - |
| GTW28_RS04115 (GTW28_04115) | - | 773517..774520 (+) | 1004 | Protein_766 | hypothetical protein | - |
| GTW28_RS04120 (GTW28_04120) | - | 774648..775505 (+) | 858 | WP_046380837.1 | hypothetical protein | - |
| GTW28_RS04125 (GTW28_04125) | rapC | 775669..776799 (+) | 1131 | WP_046380838.1 | response regulator aspartate phosphatase RapH | Regulator |
| GTW28_RS04130 (GTW28_04130) | phrH | 776789..776962 (+) | 174 | WP_032722986.1 | phosphatase RapH inhibitor PhrH | - |
| GTW28_RS04135 (GTW28_04135) | yeeI | 777122..777841 (+) | 720 | WP_003233863.1 | YebC/PmpR family DNA-binding transcriptional regulator | - |
| GTW28_RS04140 (GTW28_04140) | yeeK | 777975..778421 (+) | 447 | WP_046380839.1 | spore coat protein YeeK | - |
| GTW28_RS04145 (GTW28_04145) | yezE | 778536..779120 (+) | 585 | WP_046380840.1 | TetR/AcrR family transcriptional regulator | - |
| GTW28_RS04150 (GTW28_04150) | yesE | 779200..779646 (+) | 447 | WP_046380841.1 | nuclear transport factor 2 family protein | - |
| GTW28_RS04155 (GTW28_04155) | yesF | 779643..780505 (+) | 863 | Protein_774 | NmrA family NAD(P)-binding protein | - |
| GTW28_RS04160 (GTW28_04160) | cotJA | 780635..780883 (+) | 249 | WP_003219489.1 | spore coat-associated protein CotJA | - |
| GTW28_RS04165 (GTW28_04165) | cotJB | 780867..781130 (+) | 264 | WP_003219491.1 | spore coat protein CotJB | - |
| GTW28_RS04170 (GTW28_04170) | cotJC | 781145..781714 (+) | 570 | WP_003233850.1 | spore coat protein CotJC | - |
Sequence
Protein
Download Length: 376 a.a. Molecular weight: 43978.31 Da Isoelectric Point: 5.8869
>NTDB_id=359844 GTW28_RS04125 WP_046380838.1 775669..776799(+) (rapC) [Bacillus subtilis strain BJQ0005]
MSQAIPSSRVGVKINEWYKMIRQFSVPDAEVLKAEVEQDIQRMEEDQDLLIYYSLMCFRHQLMLDYLEPGQPYGNRPTVT
ELLESIETPQKKLTGLLKYYSLFFRGMYEFDQKEYVEAIGYYREAEKELPFVSDEIEKAEFHFKVAEAYYHMKQTHVSMH
HILQALDIYQKNPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAV
EHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITARSHKFYKELFLFLQAVYKETVDERKIHDL
ISYFEKKNLHAYIEACARSAAAVFESSCHFEQAAAFYRKVLKAQEDILKGECLYAY
MSQAIPSSRVGVKINEWYKMIRQFSVPDAEVLKAEVEQDIQRMEEDQDLLIYYSLMCFRHQLMLDYLEPGQPYGNRPTVT
ELLESIETPQKKLTGLLKYYSLFFRGMYEFDQKEYVEAIGYYREAEKELPFVSDEIEKAEFHFKVAEAYYHMKQTHVSMH
HILQALDIYQKNPLYSIRTIQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAV
EHFQKAAKVSREKVPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITARSHKFYKELFLFLQAVYKETVDERKIHDL
ISYFEKKNLHAYIEACARSAAAVFESSCHFEQAAAFYRKVLKAQEDILKGECLYAY
Nucleotide
Download Length: 1131 bp
>NTDB_id=359844 GTW28_RS04125 WP_046380838.1 775669..776799(+) (rapC) [Bacillus subtilis strain BJQ0005]
TTGAGTCAAGCCATACCGTCTTCGCGTGTTGGTGTTAAGATTAATGAATGGTATAAAATGATTCGCCAGTTCAGTGTTCC
GGATGCTGAGGTTCTGAAAGCGGAGGTGGAGCAGGACATTCAGAGGATGGAAGAGGATCAGGATTTGCTGATCTATTATT
CTCTGATGTGTTTCCGGCACCAGCTGATGCTGGATTATTTGGAGCCGGGACAACCTTACGGGAATCGCCCTACAGTGACA
GAGCTTCTTGAATCGATTGAGACCCCTCAGAAAAAACTCACAGGCCTTTTGAAATACTACTCTTTGTTTTTCCGCGGCAT
GTATGAATTTGATCAAAAAGAATATGTGGAAGCGATCGGGTATTATCGCGAGGCGGAGAAAGAACTGCCGTTTGTGTCAG
ATGAAATTGAGAAAGCGGAATTCCATTTTAAAGTGGCCGAAGCGTATTATCACATGAAGCAAACCCATGTGTCGATGCAT
CATATTCTTCAAGCCTTAGACATTTATCAAAAAAATCCCCTATACAGCATTAGAACGATACAAAGCTTGTTTGTGATCGC
CGGCAACTATGATGATTTCAAACATTATGATAAAGCGCTCCCGCATTTAGAGGCGGCGCTGGAATTGGCAATGGACATTC
AAAATGACAGGTTTATCGCCATTTCTCTATTGAACATCGCGAACAGCTATGACAGATCAGGAGATGATCAGATGGCTGTA
GAACATTTCCAAAAAGCGGCGAAAGTAAGCAGAGAGAAAGTGCCTGATCTGCTTCCGAAAGTCTTGTTTGGATTAAGCTG
GACATTATGTAAAGCGGGCCAAACACAGAAGGCGTTTCAGTTCATAGAGGAAGGATTAGACCATATCACAGCACGTTCTC
ACAAATTTTATAAAGAATTGTTTCTGTTCTTGCAGGCCGTGTACAAGGAGACTGTTGACGAACGAAAAATTCATGATCTT
ATAAGCTATTTCGAAAAAAAGAACCTGCACGCTTACATTGAAGCATGTGCCCGGAGTGCTGCCGCTGTTTTTGAAAGCAG
CTGTCACTTTGAACAAGCCGCTGCGTTTTATCGGAAAGTGCTGAAAGCCCAAGAAGATATTTTAAAAGGAGAGTGTTTAT
ATGCCTATTAA
TTGAGTCAAGCCATACCGTCTTCGCGTGTTGGTGTTAAGATTAATGAATGGTATAAAATGATTCGCCAGTTCAGTGTTCC
GGATGCTGAGGTTCTGAAAGCGGAGGTGGAGCAGGACATTCAGAGGATGGAAGAGGATCAGGATTTGCTGATCTATTATT
CTCTGATGTGTTTCCGGCACCAGCTGATGCTGGATTATTTGGAGCCGGGACAACCTTACGGGAATCGCCCTACAGTGACA
GAGCTTCTTGAATCGATTGAGACCCCTCAGAAAAAACTCACAGGCCTTTTGAAATACTACTCTTTGTTTTTCCGCGGCAT
GTATGAATTTGATCAAAAAGAATATGTGGAAGCGATCGGGTATTATCGCGAGGCGGAGAAAGAACTGCCGTTTGTGTCAG
ATGAAATTGAGAAAGCGGAATTCCATTTTAAAGTGGCCGAAGCGTATTATCACATGAAGCAAACCCATGTGTCGATGCAT
CATATTCTTCAAGCCTTAGACATTTATCAAAAAAATCCCCTATACAGCATTAGAACGATACAAAGCTTGTTTGTGATCGC
CGGCAACTATGATGATTTCAAACATTATGATAAAGCGCTCCCGCATTTAGAGGCGGCGCTGGAATTGGCAATGGACATTC
AAAATGACAGGTTTATCGCCATTTCTCTATTGAACATCGCGAACAGCTATGACAGATCAGGAGATGATCAGATGGCTGTA
GAACATTTCCAAAAAGCGGCGAAAGTAAGCAGAGAGAAAGTGCCTGATCTGCTTCCGAAAGTCTTGTTTGGATTAAGCTG
GACATTATGTAAAGCGGGCCAAACACAGAAGGCGTTTCAGTTCATAGAGGAAGGATTAGACCATATCACAGCACGTTCTC
ACAAATTTTATAAAGAATTGTTTCTGTTCTTGCAGGCCGTGTACAAGGAGACTGTTGACGAACGAAAAATTCATGATCTT
ATAAGCTATTTCGAAAAAAAGAACCTGCACGCTTACATTGAAGCATGTGCCCGGAGTGCTGCCGCTGTTTTTGAAAGCAG
CTGTCACTTTGAACAAGCCGCTGCGTTTTATCGGAAAGTGCTGAAAGCCCAAGAAGATATTTTAAAAGGAGAGTGTTTAT
ATGCCTATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| rapC | Bacillus subtilis subsp. subtilis str. 168 |
40.957 |
100 |
0.41 |
| rapF | Bacillus subtilis subsp. subtilis str. 168 |
39.523 |
100 |
0.396 |