Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   GTW28_RS00220 Genome accession   NZ_CP047485
Coordinates   39832..40659 (+) Length   275 a.a.
NCBI ID   WP_003226767.1    Uniprot ID   A0ABU0VCW3
Organism   Bacillus subtilis strain BJQ0005     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 34832..45659
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GTW28_RS00195 (GTW28_00195) efpO 35895..37337 (+) 1443 WP_046380714.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -
  GTW28_RS00200 (GTW28_00200) tmk 37334..37972 (+) 639 WP_046380715.1 dTMP kinase -
  GTW28_RS00205 (GTW28_00205) darA 38046..38375 (+) 330 WP_003242755.1 cyclic di-AMP receptor DarA -
  GTW28_RS00210 (GTW28_00210) yaaR 38388..38828 (+) 441 WP_009966249.1 YaaR family protein -
  GTW28_RS00215 (GTW28_00215) holB 38840..39829 (+) 990 WP_003226770.1 DNA polymerase III subunit delta' -
  GTW28_RS00220 (GTW28_00220) yaaT 39832..40659 (+) 828 WP_003226767.1 competence/sporulation regulator complex protein RicT Regulator
  GTW28_RS00225 (GTW28_00225) yabA 40674..41033 (+) 360 WP_003218308.1 replication initiation-control protein YabA -
  GTW28_RS00230 (GTW28_00230) trmNF 41092..41835 (+) 744 WP_003244526.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  GTW28_RS00235 (GTW28_00235) yazA 41822..42121 (+) 300 WP_046380716.1 GIY-YIG nuclease family protein -
  GTW28_RS00240 (GTW28_00240) rsmI 42096..42974 (+) 879 WP_046380717.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  GTW28_RS00245 (GTW28_00245) abrB 43023..43313 (-) 291 WP_003226760.1 transition state genes transcriptional regulator AbrB Regulator

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 31233.09 Da        Isoelectric Point: 4.7700

>NTDB_id=359816 GTW28_RS00220 WP_003226767.1 39832..40659(+) (yaaT) [Bacillus subtilis strain BJQ0005]
MYNVIGVRFKKAGKIYYFDPNGFHIEHDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADERDLLIVEENKQ
EALSAFDICQKKVIEHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDIGEMITTANGPAKVVGLNI
LERVLQVELINREKVIEYTWEELLEEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=359816 GTW28_RS00220 WP_003226767.1 39832..40659(+) (yaaT) [Bacillus subtilis strain BJQ0005]
TTGTACAATGTAATTGGTGTCCGCTTTAAGAAAGCGGGTAAAATATATTATTTTGATCCGAATGGATTTCATATAGAACA
TGACAGCTGCGTAATTGTAGAAACTGTCAGAGGCGTTGAGTACGGCCAGGTCGTAATTGCAAATAAACAGGTGGATGAGC
ATGATGTGGTGCTTCCCCTTCGAAAAGTGATACGTGTAGCTGACGAGCGCGATCTTCTCATTGTAGAAGAAAATAAACAG
GAAGCACTATCAGCATTTGATATCTGCCAAAAGAAAGTGATTGAGCATGGCTTGGATATGAAGCTGGTCGATGTTGAATT
CACGTTTGATCGCAATAAAGTCATTTTTTACTTCACTGCTGACGGCCGAGTCGACTTTAGAGAGCTTGTAAAGGATTTGG
CTTCTATCTTTAAGACAAGAATTGAGCTGCGCCAAATCGGAGTGAGGGATGAGGCAAAAATGCTCGGAGGAATCGGTCCT
TGCGGAAGAATGCTTTGCTGTTCAACGTTTCTTGGAGATTTTGAACCCGTTTCCATTAAAATGGCCAAGGATCAGAACTT
GTCTTTAAATCCTACGAAGATTTCGGGCCTTTGCGGACGATTGATGTGCTGTCTAAAATATGAGAACGATGAGTATGAGA
CGGCAAAAGAACAGCTTCCGGATATAGGAGAAATGATTACGACAGCAAACGGTCCCGCGAAGGTCGTCGGACTAAATATT
CTGGAACGGGTGCTTCAGGTGGAACTGATAAACCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG
CGTCGTATCCGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

99.636

100

0.996