Detailed information NTG0359696

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: GTK64_RS13435
• Genome accession: NZ_CP047461
• Coordinates: 2791657..2792640 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196486.1
• Uniprot ID: A7ZT85
• Organism: Escherichia coli strain ZF34
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 2786657..2797640

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GTK64_RS13415 (GTK64_13380)	hmsP	2786782..2788770 (-)	1989	WP_001266293.1	biofilm formation regulator HmsP	-
GTK64_RS13420 (GTK64_13385)	-	2788852..2789031 (-)	180	Protein_2651	cellulose synthase subunit BcsC-related outer membrane protein	-
GTK64_RS13425 (GTK64_13390)	yhjV	2789355..2790626 (+)	1272	WP_001295225.1	aromatic amino acid transport family protein	-
GTK64_RS13430 (GTK64_13395)	dppF	2790656..2791660 (-)	1005	WP_000107012.1	dipeptide ABC transporter ATP-binding subunit DppF	-
GTK64_RS13435 (GTK64_13400)	amiE	2791657..2792640 (-)	984	WP_001196486.1	dipeptide ABC transporter ATP-binding protein	Regulator
GTK64_RS13440 (GTK64_13405)	dppC	2792651..2793553 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
GTK64_RS13445 (GTK64_13410)	dppB	2793563..2794582 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
GTK64_RS23660	-	2794746..2794856 (+)	111	Protein_2657	hypothetical protein	-
GTK64_RS13455 (GTK64_13415)	dppA	2794890..2796497 (-)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35844.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=359696 GTK64_RS13435 WP_001196486.1 2791657..2792640(-) (amiE) [Escherichia coli strain ZF34]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=359696 GTK64_RS13435 WP_001196486.1 2791657..2792640(-) (amiE) [Escherichia coli strain ZF34]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCGCCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCACTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCAGAAAAACTGGAGTTTAACGGCCAGGATTTGCAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGAGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACCGGTGATGCGCACGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCAGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTCGTTCCCGGCAAGTACGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: A7ZT85

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404