Detailed information NTG0359546

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: MS6193_RS19055
• Genome accession: NZ_CP047405
• Coordinates: 3920980..3921963 (-)
• Length: 327 a.a.
• NCBI ID: WP_001196496.1
• Uniprot ID: Q3YVS2
• Organism: Escherichia coli strain MS6193
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 3915980..3926963

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
MS6193_RS19030 (MS6193_03884)	-	3917129..3917236 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
MS6193_RS19035 (MS6193_03886)	-	3917612..3917719 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
MS6193_RS19040 (MS6193_03889)	-	3918095..3918202 (-)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
MS6193_RS19045 (MS6193_03891)	yhjV	3918678..3919949 (+)	1272	WP_001307456.1	aromatic amino acid transport family protein	-
MS6193_RS19050 (MS6193_03892)	dppF	3919979..3920983 (-)	1005	WP_000107035.1	dipeptide ABC transporter ATP-binding subunit DppF	-
MS6193_RS19055 (MS6193_03893)	amiE	3920980..3921963 (-)	984	WP_001196496.1	dipeptide ABC transporter ATP-binding protein	Regulator
MS6193_RS19060 (MS6193_03894)	dppC	3921974..3922876 (-)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
MS6193_RS19065 (MS6193_03895)	dppB	3922886..3923905 (-)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
MS6193_RS19070 (MS6193_03896)	dppA	3924056..3925663 (-)	1608	WP_001222883.1	dipeptide ABC transporter substrate-binding protein DppA	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35814.38 Da
• Isoelectric Point: 6.7584

>NTDB_id=359546 MS6193_RS19055 WP_001196496.1 3920980..3921963(-) (amiE) [Escherichia coli strain MS6193]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLVFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=359546 MS6193_RS19055 WP_001196496.1 3920980..3921963(-) (amiE) [Escherichia coli strain MS6193]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTTGGGATTGTGGGTGAGTCCGGCTCCGGTAAGTCGGTCAGTTCCCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAACTGGTGTTTAACGGTCAGGATTTGCAGCGTATCTCGGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCTTCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGACCAAAACTGCTGATTGCCGATGAGCCGACCACCGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTGTTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACGGGCGATGCGCATGCC
ATCTTCCATGCGCCGCGTCACCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCATCGTTGCCTGGCGTCGTTCCCGGCAAGTACGATCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCGCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCCACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

3D structure

• AlphaFold DB: Q3YVS2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.066	97.554	0.401