Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | EA719_RS10130 | Genome accession | NZ_CP039518 |
| Coordinates | 2126365..2126745 (-) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain TG22653 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2121365..2131745
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EA719_RS10100 (EA719_010100) | tadA | 2121483..2121986 (-) | 504 | WP_000033178.1 | tRNA adenosine(34) deaminase TadA | - |
| EA719_RS10105 (EA719_010105) | - | 2121993..2123117 (-) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| EA719_RS10110 (EA719_010110) | ung | 2123114..2123827 (-) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| EA719_RS10115 (EA719_010115) | - | 2123878..2124474 (-) | 597 | WP_000908452.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| EA719_RS10120 (EA719_010120) | gspK | 2124705..2125664 (-) | 960 | WP_000301476.1 | type II secretion system minor pseudopilin GspK | - |
| EA719_RS10125 (EA719_010125) | xcpW | 2125664..2126365 (-) | 702 | WP_000594589.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| EA719_RS10130 (EA719_010130) | xcpV | 2126365..2126745 (-) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| EA719_RS10135 (EA719_010135) | - | 2126735..2127289 (-) | 555 | WP_000841373.1 | type II secretion system protein | - |
| EA719_RS10140 (EA719_010140) | - | 2127299..2127907 (-) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| EA719_RS10145 (EA719_010145) | - | 2127945..2128718 (-) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| EA719_RS10150 (EA719_010150) | - | 2128736..2129077 (-) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| EA719_RS10155 (EA719_010155) | - | 2129089..2130069 (-) | 981 | WP_001075411.1 | DNA polymerase III subunit delta' | - |
| EA719_RS10160 (EA719_010160) | kdsB | 2130081..2130842 (-) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=359482 EA719_RS10130 WP_000836911.1 2126365..2126745(-) (xcpV) [Acinetobacter baumannii strain TG22653]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=359482 EA719_RS10130 WP_000836911.1 2126365..2126745(-) (xcpV) [Acinetobacter baumannii strain TG22653]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |