Detailed information NTG0359311

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: GSY53_RS09475
• Genome accession: NZ_CP047325
• Coordinates: 1817859..1818980 (+)
• Length: 373 a.a.
• NCBI ID: WP_003234740.1
• Uniprot ID: -
• Organism: Bacillus subtilis strain GOT9
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 1812859..1823980

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GSY53_RS09450 (GSY53_09450)	ycdA	1812864..1813928 (-)	1065	WP_003234750.1	DUF4352 domain-containing protein	-
GSY53_RS09455 (GSY53_09455)	-	1813951..1814082 (-)	132	WP_003246334.1	hypothetical protein	-
GSY53_RS09460 (GSY53_09460)	ycdB	1814256..1815677 (+)	1422	WP_003234747.1	YcdB/YcdC domain-containing protein	-
GSY53_RS09465 (GSY53_09465)	ycdC	1815864..1817225 (+)	1362	WP_032677560.1	YcdB/YcdC domain-containing protein	-
GSY53_RS09470 (GSY53_09470)	cwlK	1817233..1817736 (-)	504	WP_021481861.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
GSY53_RS09475 (GSY53_09475)	rapF	1817859..1818980 (+)	1122	WP_003234740.1	response regulator aspartate phosphatase RapJ	Regulator
GSY53_RS09480 (GSY53_09480)	ycdF	1819088..1819864 (+)	777	WP_003234739.1	SDR family oxidoreductase	-
GSY53_RS09485 (GSY53_09485)	ycdG	1819889..1821574 (+)	1686	WP_003234736.1	alpha-glucosidase	-
GSY53_RS09490 (GSY53_09490)	znuA	1821762..1822721 (+)	960	WP_003234733.1	metal ABC transporter substrate-binding protein	-
GSY53_RS09495 (GSY53_09495)	znuC	1822777..1823472 (+)	696	WP_003234730.1	zinc ABC transporter ATP-binding protein ZnuC	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44427.31 Da
• Isoelectric Point: 4.8344

>NTDB_id=359311 GSY53_RS09475 WP_003234740.1 1817859..1818980(+) (rapF) [Bacillus subtilis strain GOT9]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALTHLCSALDHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAVEAYDRGIKSAAEWEDDMYLTKFRLIHELYLGNGDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLMNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=359311 GSY53_RS09475 WP_003234740.1 1817859..1818980(+) (rapF) [Bacillus subtilis strain GOT9]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAGCAGGAGATTGAATACGATTTAGAAGATATGGAAGAGAACCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGGCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGCGACACCAAGCCTCCGTTCTCT
GATATGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTATTGGAATATTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCGATTGACCATTATAAACATGCCGAGGAAAAGCTCGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCACATTAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATCTATACGAAATATGAACTGTACGGTCGCCGCCGGGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACCGATGTGTATCATCATGAAAAAGCACTGACCCACTTGTGCAGCGCTTTAGATCATGCCAGGCAGCTTG
AAGAAGCGTACATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGATTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGAAAATACGACAAAGCAGTAGAGGCGTATGACCGCGGGATAAAGAGCGCGGCTGAATGGGAGG
ATGACATGTACTTGACGAAATTCCGCCTCATTCATGAGCTGTATCTTGGAAACGGTGACCTGAACGTGCTAACAGAATGC
TTTGACCTGCTGGAATCCAGGCAGCTTCTTGCCGACGCCGAAGATCTGCTGCATGATACAGCGGAACGTTTCAATCAACT
GGAACATTACGAGTCCGCCGCTTTCTTTTACCGCAGGCTGATGAATATTAAAAAGAAGCTTGCTGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.391	98.66	0.418
rapC	Bacillus subtilis subsp. subtilis str. 168	41.257	98.123	0.405