Detailed information    

insolico Bioinformatically predicted

Overview

Name   yaaT   Type   Regulator
Locus tag   GSY53_RS08020 Genome accession   NZ_CP047325
Coordinates   1555061..1555888 (+) Length   275 a.a.
NCBI ID   WP_003226767.1    Uniprot ID   A0ABU0VCW3
Organism   Bacillus subtilis strain GOT9     
Function   accelerate the production of Spo0A~P (predicted from homology)   
Competence regulation

Genomic Context

Location: 1550061..1560888
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GSY53_RS07995 (GSY53_07995) efpO 1551124..1552566 (+) 1443 WP_003226777.1 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme -
  GSY53_RS08000 (GSY53_08000) tmk 1552563..1553201 (+) 639 WP_003226776.1 dTMP kinase -
  GSY53_RS08005 (GSY53_08005) darA 1553275..1553604 (+) 330 WP_003242755.1 cyclic di-AMP receptor DarA -
  GSY53_RS08010 (GSY53_08010) yaaR 1553617..1554057 (+) 441 WP_009966249.1 YaaR family protein -
  GSY53_RS08015 (GSY53_08015) holB 1554069..1555058 (+) 990 WP_003226770.1 DNA polymerase III subunit delta' -
  GSY53_RS08020 (GSY53_08020) yaaT 1555061..1555888 (+) 828 WP_003226767.1 competence/sporulation regulator complex protein RicT Regulator
  GSY53_RS08025 (GSY53_08025) yabA 1555903..1556262 (+) 360 WP_003218308.1 replication initiation-control protein YabA -
  GSY53_RS08030 (GSY53_08030) trmNF 1556321..1557064 (+) 744 WP_003226765.1 tRNA1(Val) (adenine(37)-N6)-methyltransferase -
  GSY53_RS08035 (GSY53_08035) yazA 1557051..1557350 (+) 300 WP_003242983.1 GIY-YIG nuclease family protein -
  GSY53_RS08040 (GSY53_08040) rsmI 1557325..1558203 (+) 879 WP_003243457.1 16S rRNA (cytidine(1402)-2'-O)-methyltransferase -
  GSY53_RS08045 (GSY53_08045) abrB 1558252..1558542 (-) 291 WP_003226760.1 transition state genes transcriptional regulator AbrB Regulator

Sequence

Protein


Download         Length: 275 a.a.        Molecular weight: 31233.09 Da        Isoelectric Point: 4.7700

>NTDB_id=359303 GSY53_RS08020 WP_003226767.1 1555061..1555888(+) (yaaT) [Bacillus subtilis strain GOT9]
MYNVIGVRFKKAGKIYYFDPNGFHIEHDSCVIVETVRGVEYGQVVIANKQVDEHDVVLPLRKVIRVADERDLLIVEENKQ
EALSAFDICQKKVIEHGLDMKLVDVEFTFDRNKVIFYFTADGRVDFRELVKDLASIFKTRIELRQIGVRDEAKMLGGIGP
CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYETAKEQLPDIGEMITTANGPAKVVGLNI
LERVLQVELINREKVIEYTWEELLEEGVVSAQTTD

Nucleotide


Download         Length: 828 bp        

>NTDB_id=359303 GSY53_RS08020 WP_003226767.1 1555061..1555888(+) (yaaT) [Bacillus subtilis strain GOT9]
TTGTACAATGTAATTGGTGTCCGCTTTAAGAAAGCGGGTAAAATATATTATTTTGATCCGAATGGATTTCATATAGAACA
TGACAGCTGCGTAATTGTAGAAACTGTCAGAGGCGTTGAGTACGGCCAGGTCGTAATTGCAAATAAACAGGTGGATGAGC
ATGATGTGGTGCTTCCCCTTCGAAAAGTGATACGTGTGGCTGACGAGCGCGATCTTCTCATTGTAGAAGAAAATAAACAG
GAAGCACTATCAGCATTTGATATCTGCCAAAAGAAAGTGATTGAGCATGGCTTGGATATGAAGCTGGTCGATGTTGAATT
CACGTTTGATCGCAATAAAGTCATTTTTTACTTCACTGCTGACGGCCGAGTCGACTTTAGAGAGCTTGTAAAGGATTTGG
CTTCTATCTTTAAGACAAGAATTGAGCTGCGCCAAATCGGAGTAAGGGATGAGGCAAAAATGCTCGGAGGAATCGGTCCT
TGCGGAAGAATGCTTTGCTGTTCAACGTTTCTTGGAGATTTTGAACCCGTTTCCATTAAAATGGCCAAGGATCAGAACTT
GTCTTTAAATCCTACGAAGATTTCGGGTCTTTGCGGACGATTGATGTGCTGTCTAAAATATGAGAACGATGAGTATGAGA
CGGCAAAAGAACAGCTTCCGGATATAGGAGAAATGATTACGACAGCAAACGGTCCCGCGAAGGTCGTCGGACTAAATATT
CTGGAACGGGTGCTTCAGGTGGAACTGATAAACCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG
CGTCGTATCCGCACAAACCACAGATTAA

Domains

Predicted by InterProScan.

PSP1 C-terminal conserved region (PSP1)

(62-146)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  yaaT Bacillus subtilis subsp. subtilis str. 168

99.636

100

0.996

Multiple sequence alignment