Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   GSY53_RS07035 Genome accession   NZ_CP047325
Coordinates   1371145..1371834 (-) Length   229 a.a.
NCBI ID   WP_003243527.1    Uniprot ID   P42421
Organism   Bacillus subtilis strain GOT9     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1366145..1376834
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GSY53_RS07015 (GSY53_07015) yxeA 1367050..1367397 (-) 348 WP_003227084.1 YxeA family protein -
  GSY53_RS07020 (GSY53_07020) yxdM 1367411..1369279 (-) 1869 WP_003244410.1 ABC transporter permease YxdM -
  GSY53_RS07025 (GSY53_07025) yxdL 1369254..1370027 (-) 774 WP_003243557.1 ABC transporter ATP-binding protein YxdL -
  GSY53_RS07030 (GSY53_07030) yxdK 1370171..1371148 (-) 978 WP_003243885.1 two-component system sensor histidine kinase YxdK -
  GSY53_RS07035 (GSY53_07035) braR 1371145..1371834 (-) 690 WP_003243527.1 two-component system response regulator YxdJ Regulator
  GSY53_RS07040 (GSY53_07040) iolJ 1371942..1372814 (-) 873 WP_003242766.1 6-phospho-5-dehydro-2-deoxy-D-gluconate aldolase -
  GSY53_RS07045 (GSY53_07045) iolI 1372835..1373671 (-) 837 WP_032730291.1 2-keto-myo-inositol isomerase -
  GSY53_RS07050 (GSY53_07050) iolH 1373757..1374626 (-) 870 WP_015250852.1 sugar phosphate isomerase/epimerase -
  GSY53_RS07055 (GSY53_07055) iolG 1374646..1375680 (-) 1035 WP_032730288.1 bifunctional inositol 2-dehydrogenase/D-chiro-inositol 1-dehydrogenase -

Sequence

Protein


Download         Length: 229 a.a.        Molecular weight: 26600.34 Da        Isoelectric Point: 4.8564

>NTDB_id=359294 GSY53_RS07035 WP_003243527.1 1371145..1371834(-) (braR) [Bacillus subtilis strain GOT9]
MNKIMIVEDSEDIRGLLQNYLEKYGYQTVVAADFTAVLDVFLREKPDVVLLDINLPAYDGYYWCRQIRQHSTSPIIFISA
RSGEMDQVMAIENGGDDYIEKPFSYDIVLAKIKSQIRRAYGEYAAKQGEKVVEYAGVQLFVERFELRFQDEKSELSKKES
KLLEVLLERGEKVTSRDRLMEKTWDTDIFIDDNTLNVYITRLRKKLRELNAPVSIEAVRGEGYQLRAQS

Nucleotide


Download         Length: 690 bp        

>NTDB_id=359294 GSY53_RS07035 WP_003243527.1 1371145..1371834(-) (braR) [Bacillus subtilis strain GOT9]
TTGAATAAAATCATGATTGTGGAAGACAGTGAAGACATTCGCGGACTATTGCAGAATTACCTTGAAAAATACGGATATCA
AACAGTGGTCGCCGCGGATTTTACAGCTGTTCTTGATGTCTTTTTGCGGGAAAAGCCCGATGTGGTGCTGCTTGATATCA
ATTTGCCGGCATATGACGGATATTATTGGTGCCGGCAGATCCGCCAGCACTCCACAAGCCCGATCATCTTTATTTCTGCC
AGAAGCGGGGAAATGGATCAGGTGATGGCGATTGAAAATGGGGGAGACGATTATATCGAAAAACCGTTTTCTTATGATAT
TGTGCTTGCGAAAATCAAAAGCCAGATCCGGAGGGCGTACGGGGAGTACGCCGCAAAGCAGGGAGAGAAAGTGGTTGAAT
ATGCCGGCGTTCAGCTCTTTGTGGAACGGTTTGAACTGCGTTTTCAGGATGAAAAAAGTGAGCTTTCTAAAAAAGAAAGC
AAGCTTTTGGAAGTGCTGCTTGAGCGGGGAGAAAAGGTGACGAGTCGGGACCGTCTCATGGAAAAGACGTGGGACACCGA
CATATTCATCGATGATAATACACTTAACGTGTATATCACGCGGCTCAGAAAAAAACTGCGGGAGCTGAATGCGCCTGTTT
CTATTGAAGCGGTGCGGGGCGAAGGCTACCAGCTGAGGGCGCAGTCATGA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(151-225)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB P42421

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

41.704

97.38

0.406