Detailed information NTG0035920

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: I33_RS01565
• Genome accession: NC_017195
• Coordinates: 290914..292035 (+)
• Length: 373 a.a.
• NCBI ID: WP_014475710.1
• Uniprot ID: -
• Organism: Bacillus subtilis subsp. subtilis str. RO-NN-1
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 285914..297035

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I33_RS01545 (I33_0319)	ycdA	285919..286983 (-)	1065	WP_014475706.1	DUF4352 domain-containing protein	-
I33_RS20840	-	287006..287137 (-)	132	WP_003246334.1	hypothetical protein	-
I33_RS01550 (I33_0320)	ycdB	287311..288732 (+)	1422	WP_014475707.1	YcdB/YcdC domain-containing protein	-
I33_RS01555 (I33_0321)	ycdC	288919..290280 (+)	1362	WP_041519615.1	YcdB/YcdC domain-containing protein	-
I33_RS01560 (I33_0322)	cwlK	290288..290791 (-)	504	WP_041519067.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	-
I33_RS01565 (I33_0323)	rapF	290914..292035 (+)	1122	WP_014475710.1	response regulator aspartate phosphatase RapJ	Regulator
I33_RS01570 (I33_0324)	ycdF	292143..292919 (+)	777	WP_014475711.1	SDR family oxidoreductase	-
I33_RS01575 (I33_0325)	ycdG	292944..294629 (+)	1686	WP_014475712.1	alpha-glucosidase	-
I33_RS01580 (I33_0326)	znuA	294817..295776 (+)	960	WP_014475713.1	metal ABC transporter substrate-binding protein	-
I33_RS01585 (I33_0327)	znuC	295831..296526 (+)	696	WP_014475714.1	zinc ABC transporter ATP-binding protein ZnuC	-

Sequence

Protein

• Length: 373 a.a.
• Molecular weight: 44370.26 Da
• Isoelectric Point: 4.8344

>NTDB_id=35920 I33_RS01565 WP_014475710.1 290914..292035(+) (rapF) [Bacillus subtilis subsp. subtilis str. RO-NN-1]
MRAKIPSEEVAVKLNEWYKLIRAFEADQAEALKQEIEYDLEDMEENQDLLLYFSLMEFRHRIMLDKLMPVKDSDTKPPFS
DMLNEIESNQQKLTGLLEYYFYYFRGMYEFKQKNFILAIDHYKHAEEKLEYVEDEIEKAEFLFKVAEVYYHIKQTYFSMN
YASQALDIYTKYELYGRRRVQCEFIIAGNLTDVYHHEKALAHLCSALDHARQLEEAYMIAAAYYNVGHCKYSLGDYKEAE
GYFKTAAAIFEEHNFQQAVQAVFSLTHIYCKEGKYDKAVEAYDRGIKSAAEWEDDMYLTKFRLIHELYLGSGDLNVLTEC
FDLLESRQLLADAEDLLHDTAERFNQLEHYESAAFFYRRLMNIKKKLAEQRFQ

Nucleotide

• Length: 1122 bp

>NTDB_id=35920 I33_RS01565 WP_014475710.1 290914..292035(+) (rapF) [Bacillus subtilis subsp. subtilis str. RO-NN-1]
ATGAGAGCAAAGATTCCATCAGAAGAAGTAGCAGTAAAGCTGAATGAATGGTACAAGCTCATTCGCGCATTTGAAGCAGA
TCAAGCAGAAGCGTTAAAGCAGGAGATTGAATACGATTTAGAAGATATGGAAGAGAACCAGGACTTGCTTTTATATTTTT
CTTTGATGGAATTCCGGCATCGAATCATGCTTGATAAGCTGATGCCGGTGAAAGACAGCGACACCAAGCCTCCGTTCTCT
GATATGCTGAACGAAATTGAAAGCAATCAGCAAAAACTCACGGGCTTATTGGAATACTACTTTTATTATTTCAGAGGAAT
GTACGAATTCAAGCAGAAAAATTTCATATTAGCGATCGACCATTATAAACATGCCGAGGAGAAGCTCGAGTATGTCGAGG
ATGAGATCGAAAAAGCTGAGTTTCTTTTTAAAGTCGCAGAAGTGTATTATCACATCAAACAAACGTATTTTTCCATGAAT
TATGCGAGCCAGGCGCTTGATATCTATACGAAATATGAACTGTACGGTCGCCGCCGGGTTCAGTGTGAATTTATCATCGC
CGGAAATTTGACCGATGTGTATCATCATGAAAAAGCACTGGCCCACTTGTGCAGCGCTTTAGATCATGCCAGGCAGCTTG
AAGAAGCATACATGATCGCCGCTGCCTATTATAATGTCGGACACTGTAAGTACAGTCTGGGTGATTACAAAGAAGCGGAG
GGCTATTTCAAAACAGCCGCCGCCATTTTTGAGGAGCACAACTTTCAGCAAGCTGTTCAAGCTGTATTTTCACTGACCCA
TATCTACTGTAAAGAGGGAAAATACGACAAAGCAGTAGAGGCTTATGACCGCGGGATAAAGAGCGCGGCTGAATGGGAGG
ATGACATGTACTTGACGAAATTCCGCCTCATTCATGAGCTGTATCTTGGAAGCGGCGACCTGAACGTGCTTACAGAATGC
TTTGACCTGCTGGAATCCAGGCAGCTTCTTGCCGACGCCGAAGATCTGCTGCATGATACAGCGGAACGTTTCAATCAGCT
GGAACATTACGAGTCCGCCGCTTTCTTTTACCGCAGGCTGATGAATATTAAAAAGAAGCTTGCCGAGCAGCGTTTTCAAT
AG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	42.391	98.66	0.418
rapC	Bacillus subtilis subsp. subtilis str. 168	41.257	98.123	0.405