Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   GSY65_RS27785 Genome accession   NZ_CP047318
Coordinates   6495919..6496695 (-) Length   258 a.a.
NCBI ID   WP_159773763.1    Uniprot ID   A0ABW1BBH8
Organism   Streptomyces sp. HM190     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 6490919..6501695
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  GSY65_RS27775 - 6492819..6493571 (+) 753 WP_159773759.1 GNAT family N-acetyltransferase -
  GSY65_RS27780 - 6493806..6495782 (+) 1977 WP_159773761.1 ATP-dependent DNA helicase -
  GSY65_RS27785 dinR/lexA 6495919..6496695 (-) 777 WP_159773763.1 transcriptional repressor LexA Regulator
  GSY65_RS27790 nrdR 6497281..6497841 (+) 561 WP_159773765.1 transcriptional regulator NrdR -
  GSY65_RS27795 - 6498002..6500896 (+) 2895 WP_159773767.1 vitamin B12-dependent ribonucleotide reductase -
  GSY65_RS27800 - 6500976..6501539 (-) 564 WP_159773769.1 TerD family protein -

Sequence

Protein


Download         Length: 258 a.a.        Molecular weight: 27898.65 Da        Isoelectric Point: 7.0664

>NTDB_id=359156 GSY65_RS27785 WP_159773763.1 6495919..6496695(-) (dinR/lexA) [Streptomyces sp. HM190]
MTTTADSATITAQDRSQGRLEPVHAMNDVPNHDGPKRALPGRPPGIRADSSGLTDRQRRVIEVIRDSVQRRGYPPSMREI
GQAVGLSSTSSVAHQLMALERKGFLRRDPHRPRAYEVRGSDQAVAQPTDTAGKPAASYVPLVGRIAAGGPILAEESVEDV
FPLPRQLVGDGELFVLKVVGDSMIEAAICDGDWVTVRRQPVAENGDIVAAMLDGEATVKRFKREDGHVWLLPHNAAYEPI
PGDDATILGKVVAVLRRV

Nucleotide


Download         Length: 777 bp        

>NTDB_id=359156 GSY65_RS27785 WP_159773763.1 6495919..6496695(-) (dinR/lexA) [Streptomyces sp. HM190]
GTGACCACGACCGCAGACAGCGCCACCATCACTGCCCAGGACCGCTCCCAGGGCCGACTCGAGCCGGTGCACGCGATGAA
CGACGTTCCGAACCATGACGGGCCCAAGCGGGCCCTGCCCGGCCGACCTCCAGGCATCAGGGCGGACAGCTCCGGACTGA
CCGACCGGCAGCGCCGGGTGATCGAGGTGATCAGGGACTCCGTGCAACGCCGCGGGTACCCGCCGTCCATGCGGGAGATC
GGGCAGGCGGTCGGCCTGTCGAGCACGTCGTCCGTGGCGCACCAGCTGATGGCCCTGGAGCGCAAGGGCTTCCTGCGCCG
CGACCCGCACCGCCCGCGCGCCTACGAGGTCCGCGGCTCGGACCAGGCCGTGGCGCAGCCGACCGACACCGCCGGCAAGC
CCGCCGCGTCGTACGTGCCGCTCGTCGGCCGGATCGCGGCCGGCGGGCCGATCCTGGCGGAGGAGTCGGTCGAGGACGTG
TTCCCGCTTCCGCGGCAGCTGGTCGGTGACGGCGAGCTGTTCGTCCTGAAGGTCGTGGGTGACTCGATGATCGAGGCCGC
GATCTGCGACGGCGACTGGGTGACGGTCCGCCGCCAGCCGGTCGCCGAGAACGGCGACATCGTCGCCGCCATGCTGGACG
GCGAGGCGACCGTCAAGCGCTTCAAGCGCGAGGACGGCCATGTGTGGCTGCTGCCGCACAACGCCGCCTACGAGCCCATC
CCGGGTGACGACGCGACCATCCTCGGCAAGGTGGTGGCGGTCCTGCGCCGCGTCTGA

Domains

Predicted by InterProScan.

Peptidase S24-like (Peptidase_S24)

(140-252)

LexA DNA binding domain (LexA_DNA_bind)

(51-114)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

47.143

81.395

0.384