Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   E8M06_RS09105 Genome accession   NZ_CP039462
Coordinates   1848281..1849015 (-) Length   244 a.a.
NCBI ID   WP_015647345.1    Uniprot ID   A0A116LFJ4
Organism   Streptococcus suis strain WUSS351     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1843281..1854015
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E8M06_RS09075 (E8M06_09085) - 1843509..1843805 (-) 297 WP_002942375.1 YlxR family protein -
  E8M06_RS09080 (E8M06_09090) nusA 1843822..1844964 (-) 1143 WP_004194726.1 transcription termination factor NusA -
  E8M06_RS09085 (E8M06_09095) rimP 1845037..1845507 (-) 471 WP_024412918.1 ribosome maturation factor RimP -
  E8M06_RS09090 (E8M06_09100) trmB 1845765..1846403 (-) 639 WP_002939002.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  E8M06_RS09095 (E8M06_09105) - 1846400..1847194 (-) 795 WP_002942360.1 phosphotransferase family protein -
  E8M06_RS09100 (E8M06_09110) - 1847244..1848284 (-) 1041 WP_136581538.1 ABC transporter permease -
  E8M06_RS09105 (E8M06_09115) pptA 1848281..1849015 (-) 735 WP_015647345.1 ABC transporter ATP-binding protein Regulator
  E8M06_RS09110 (E8M06_09120) - 1849078..1849491 (+) 414 WP_044669149.1 HIT family protein -
  E8M06_RS09115 (E8M06_09125) - 1849493..1849795 (+) 303 WP_012027753.1 methyl-accepting chemotaxis protein -
  E8M06_RS09120 (E8M06_09130) - 1849904..1851097 (-) 1194 WP_044668818.1 LCP family protein -
  E8M06_RS09125 (E8M06_09135) - 1851094..1851621 (-) 528 WP_002939196.1 GNAT family N-acetyltransferase -
  E8M06_RS09130 (E8M06_09140) tsaE 1851614..1852054 (-) 441 WP_024376437.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  E8M06_RS09135 (E8M06_09145) - 1852156..1853820 (-) 1665 WP_029171025.1 DAK2 domain-containing protein -

Sequence

Protein


Download         Length: 244 a.a.        Molecular weight: 26862.13 Da        Isoelectric Point: 4.3606

>NTDB_id=358863 E8M06_RS09105 WP_015647345.1 1848281..1849015(-) (pptA) [Streptococcus suis strain WUSS351]
MLEVKNVTGGYVNIPVLKDVSFTVEDGQLVGLIGLNGAGKSTTIKEIIGLLTPYQGQIAIDGLTLLQGAENYRKKIGFIP
ETPSLYEELTLKEHLEVVAMAYDLSWEQAWGRVEHLLKLFRLDEKLDWFPVNFSKGMKQKVMIICAFMVEPSLLIVDEPF
LGLDPVAISDLIALLEEEKSKGTSILMSTHVLDSAEKMCDSFVILHQGQVRATGNLEELQSTFGMDGASLNEIYLALTQE
GVAG

Nucleotide


Download         Length: 735 bp        

>NTDB_id=358863 E8M06_RS09105 WP_015647345.1 1848281..1849015(-) (pptA) [Streptococcus suis strain WUSS351]
ATGTTAGAAGTAAAAAATGTAACTGGAGGATATGTCAATATCCCAGTTTTGAAAGATGTATCTTTTACCGTTGAGGATGG
TCAATTAGTTGGTCTAATTGGTTTAAATGGTGCAGGGAAATCAACAACTATTAAGGAAATTATCGGTCTTTTGACCCCCT
ATCAAGGGCAGATTGCAATTGACGGCCTAACTTTGCTGCAAGGGGCTGAAAATTATCGGAAGAAGATTGGGTTTATCCCT
GAAACACCAAGTTTGTATGAAGAACTAACCCTCAAAGAGCACTTGGAAGTGGTAGCAATGGCCTATGATTTATCCTGGGA
GCAAGCTTGGGGACGTGTTGAGCACTTGTTAAAACTGTTTCGCTTGGATGAGAAATTGGACTGGTTTCCTGTCAATTTTT
CAAAGGGAATGAAGCAGAAGGTCATGATTATTTGTGCTTTTATGGTGGAGCCGAGTCTGTTGATTGTTGATGAGCCTTTT
CTGGGATTAGACCCCGTGGCTATCTCTGACTTGATCGCTCTTTTGGAGGAAGAAAAATCTAAGGGCACTTCAATCCTCAT
GTCCACTCACGTTCTTGACTCAGCTGAGAAAATGTGCGACTCTTTTGTGATTTTACATCAGGGACAGGTTCGTGCAACTG
GAAATTTGGAGGAGCTACAAAGCACATTTGGTATGGATGGTGCAAGTCTGAATGAAATTTATCTGGCCTTGACGCAAGAA
GGAGTGGCTGGATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A116LFJ4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

75.732

97.951

0.742
  pptA Streptococcus thermophilus LMD-9

74.059

97.951

0.725

Multiple sequence alignment