Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | E8M05_RS10615 | Genome accession | NZ_CP039457 |
| Coordinates | 2032374..2034815 (-) | Length | 813 a.a. |
| NCBI ID | WP_048790992.1 | Uniprot ID | A0AAW6YDE5 |
| Organism | Streptococcus pasteurianus strain WUSP067 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 2027374..2039815
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E8M05_RS10595 (E8M05_10585) | - | 2028115..2028942 (+) | 828 | WP_003066817.1 | membrane protein | - |
| E8M05_RS10600 (E8M05_10590) | - | 2028972..2030249 (+) | 1278 | WP_003066819.1 | toxic anion resistance protein | - |
| E8M05_RS10605 (E8M05_10595) | hslO | 2030464..2031330 (+) | 867 | WP_003066821.1 | Hsp33 family molecular chaperone HslO | - |
| E8M05_RS10610 (E8M05_10600) | dusB | 2031323..2032300 (+) | 978 | WP_003066823.1 | tRNA dihydrouridine synthase DusB | - |
| E8M05_RS10615 (E8M05_10605) | clpC | 2032374..2034815 (-) | 2442 | WP_048790992.1 | ATP-dependent Clp protease ATP-binding subunit | Regulator |
| E8M05_RS10620 (E8M05_10610) | - | 2034812..2035273 (-) | 462 | WP_003066826.1 | CtsR family transcriptional regulator | - |
| E8M05_RS10625 (E8M05_10615) | - | 2035948..2036412 (+) | 465 | WP_003066829.1 | small multi-drug export protein | - |
| E8M05_RS10630 (E8M05_10620) | tsf | 2036541..2037578 (-) | 1038 | WP_048790991.1 | translation elongation factor Ts | - |
| E8M05_RS10635 (E8M05_10625) | rpsB | 2037690..2038457 (-) | 768 | WP_013852317.1 | 30S ribosomal protein S2 | - |
Sequence
Protein
Download Length: 813 a.a. Molecular weight: 89925.29 Da Isoelectric Point: 5.8507
>NTDB_id=358812 E8M05_RS10615 WP_048790992.1 2032374..2034815(-) (clpC) [Streptococcus pasteurianus strain WUSP067]
MSEYSIKMQEVFSVAQYQAARFESPYLESWHVLLAMVAIHDSVAGLTFAEYQTKIAYEEYEAAAVLAIGKSPLTDVDRVH
FVEQSKALSDVLAFAESICQVTGGNEIGTEHVLYAMLLNLDLFATRLLEVAGFKNKEDGDAARLIDLRKSLARNAGFTKE
NIKAIHGLRKPKKATMGGAFSEMMKPQSTAGDLSDFTRDLTEMAGQGKLEPVIGREKEISRMVQVLSRKTKNNPVLVGEA
GVGKTALAYGLAQRIVNGAIPYELQDMRVLELDMMSVVAGTRFRGDFEERMNQIISDIEEDGHIILFIDEVHTIMGSGSG
IDSTLDAANILKPALARGTLHMVGATTQEEYQKHLEKDAALSRRFAKITIEEPSVEDAYQILLGLKKSYEDFHNVVISDE
AVLTAVKAAHRYLTSKNLPDSAIDLLDEASATVQGLVKKEAPATLTPADKAILEGDFKLATKLLKESRKKPNRKPTAVTE
DDIMATLSRLSGIPVEKMTQADSKKYLNLEKELHKRVIGQDSAISAISRAIRRNQAGIRTGKRPIGSFMFLGPTGVGKTE
LAKALAELLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQV
LDDGVLTDSRGRKVDFSNTIIIMTSNLGATALRDEKTVGFGARDMAHDYEAMQKRIMEELKKAYRPEFINRIDEKVVFHN
LTQENMRDVVKIMVKPLIATLAEKDITLKFQPSALKYLAEIGYDPEMGARPLRRTLQDKVEDELSELILSGELASGNTLK
IGVSKGKLKFDIA
MSEYSIKMQEVFSVAQYQAARFESPYLESWHVLLAMVAIHDSVAGLTFAEYQTKIAYEEYEAAAVLAIGKSPLTDVDRVH
FVEQSKALSDVLAFAESICQVTGGNEIGTEHVLYAMLLNLDLFATRLLEVAGFKNKEDGDAARLIDLRKSLARNAGFTKE
NIKAIHGLRKPKKATMGGAFSEMMKPQSTAGDLSDFTRDLTEMAGQGKLEPVIGREKEISRMVQVLSRKTKNNPVLVGEA
GVGKTALAYGLAQRIVNGAIPYELQDMRVLELDMMSVVAGTRFRGDFEERMNQIISDIEEDGHIILFIDEVHTIMGSGSG
IDSTLDAANILKPALARGTLHMVGATTQEEYQKHLEKDAALSRRFAKITIEEPSVEDAYQILLGLKKSYEDFHNVVISDE
AVLTAVKAAHRYLTSKNLPDSAIDLLDEASATVQGLVKKEAPATLTPADKAILEGDFKLATKLLKESRKKPNRKPTAVTE
DDIMATLSRLSGIPVEKMTQADSKKYLNLEKELHKRVIGQDSAISAISRAIRRNQAGIRTGKRPIGSFMFLGPTGVGKTE
LAKALAELLFDDESALIRFDMSEYMEKFAASRLNGAPPGYVGYEEGGELTEKVRNKPYSVLLFDEVEKAHPDIFNVLLQV
LDDGVLTDSRGRKVDFSNTIIIMTSNLGATALRDEKTVGFGARDMAHDYEAMQKRIMEELKKAYRPEFINRIDEKVVFHN
LTQENMRDVVKIMVKPLIATLAEKDITLKFQPSALKYLAEIGYDPEMGARPLRRTLQDKVEDELSELILSGELASGNTLK
IGVSKGKLKFDIA
Nucleotide
Download Length: 2442 bp
>NTDB_id=358812 E8M05_RS10615 WP_048790992.1 2032374..2034815(-) (clpC) [Streptococcus pasteurianus strain WUSP067]
ATGAGTGAGTATTCGATAAAAATGCAAGAGGTTTTCAGTGTTGCTCAATACCAAGCAGCGCGTTTTGAAAGCCCATATTT
AGAAAGTTGGCACGTCCTTTTAGCTATGGTTGCTATCCATGACTCAGTCGCAGGGCTAACATTTGCGGAATACCAAACTA
AAATCGCCTATGAAGAATATGAAGCGGCAGCTGTTTTAGCCATTGGGAAATCACCGTTAACGGACGTTGACAGAGTTCAT
TTTGTAGAACAATCTAAAGCTCTTAGTGACGTTTTAGCATTTGCTGAGTCTATTTGTCAGGTGACTGGCGGTAACGAAAT
CGGGACAGAACACGTGCTTTATGCGATGTTGTTAAACCTTGATTTATTTGCCACACGTTTGCTAGAAGTTGCTGGTTTTA
AAAATAAAGAAGACGGTGACGCTGCTCGTTTGATTGATTTGCGTAAGAGTTTGGCACGTAATGCTGGTTTTACAAAGGAA
AATATCAAGGCTATTCATGGGCTTCGTAAGCCGAAAAAAGCGACAATGGGCGGTGCTTTTTCTGAAATGATGAAACCACA
GTCAACAGCGGGGGATTTGTCAGATTTCACGCGTGATTTGACAGAGATGGCAGGTCAAGGAAAATTAGAACCTGTTATCG
GTCGTGAAAAAGAAATTTCTCGTATGGTGCAGGTGCTTAGTCGCAAAACGAAAAACAATCCAGTTTTAGTAGGGGAAGCT
GGTGTTGGTAAAACGGCTCTTGCTTACGGTTTGGCACAGCGAATTGTCAATGGTGCGATTCCGTATGAACTCCAAGACAT
GCGTGTTTTAGAGCTTGATATGATGAGCGTTGTGGCTGGTACGCGATTCCGTGGTGATTTTGAAGAACGCATGAACCAAA
TCATCTCAGATATTGAGGAAGACGGTCATATTATTCTTTTCATTGACGAAGTGCATACGATTATGGGTTCAGGCTCTGGA
ATTGACAGCACTTTGGATGCGGCTAATATTCTAAAACCAGCGCTTGCGCGTGGTACGCTTCATATGGTTGGTGCGACAAC
GCAAGAAGAATATCAAAAACATCTTGAAAAAGATGCGGCGCTTTCTCGCCGTTTTGCTAAGATTACCATTGAAGAACCAA
GTGTTGAAGATGCTTACCAAATCTTGCTTGGGTTAAAGAAATCATATGAAGATTTTCATAATGTGGTGATTTCTGACGAA
GCTGTTTTAACGGCTGTCAAAGCTGCGCATCGCTATTTGACAAGTAAAAATCTTCCTGACTCAGCGATTGATTTGCTTGA
TGAAGCAAGTGCAACGGTTCAAGGTTTGGTGAAAAAAGAAGCGCCAGCTACTTTGACACCTGCTGATAAAGCTATTTTGG
AAGGTGATTTCAAATTGGCAACGAAATTGCTGAAAGAGTCACGCAAGAAGCCAAATCGTAAACCAACTGCTGTGACAGAA
GATGATATTATGGCAACGCTCAGTCGTTTGTCAGGTATTCCTGTTGAGAAAATGACACAGGCAGATAGTAAGAAATACTT
GAACCTTGAAAAAGAACTCCATAAGCGTGTGATTGGCCAAGATTCAGCTATTTCAGCGATTAGTCGTGCTATTCGTCGTA
ATCAAGCGGGCATTCGTACAGGCAAACGTCCGATTGGGTCGTTTATGTTCTTGGGTCCAACGGGTGTTGGTAAAACAGAG
TTGGCTAAAGCACTAGCAGAACTGCTATTTGATGATGAATCTGCTCTTATCCGTTTTGATATGTCTGAGTATATGGAAAA
ATTTGCGGCGAGTCGTCTTAACGGAGCTCCTCCAGGATATGTCGGTTACGAAGAAGGTGGCGAATTGACTGAAAAAGTTC
GCAACAAACCTTATTCTGTGCTTCTATTTGACGAAGTTGAAAAAGCCCACCCAGATATTTTCAATGTGCTTCTCCAAGTG
TTGGATGACGGTGTGCTGACGGATAGTCGTGGTCGTAAAGTTGATTTTTCAAACACGATTATCATCATGACATCAAATCT
TGGGGCAACCGCTTTGCGTGATGAAAAGACAGTTGGTTTTGGTGCGCGTGATATGGCTCATGATTATGAGGCAATGCAAA
AACGCATCATGGAAGAACTCAAAAAAGCTTACCGACCTGAATTCATCAACCGTATTGATGAAAAGGTTGTTTTCCACAAC
TTAACTCAAGAAAATATGCGTGATGTCGTGAAAATCATGGTTAAACCATTGATTGCGACACTAGCTGAAAAAGATATTAC
GCTAAAATTCCAACCATCAGCATTGAAATATTTAGCCGAAATTGGATACGACCCAGAAATGGGAGCTCGTCCGCTTCGCC
GTACTCTGCAAGATAAAGTTGAAGATGAATTATCAGAGCTTATTCTATCAGGCGAATTGGCAAGTGGAAATACCCTTAAA
ATCGGCGTTTCTAAAGGGAAACTCAAATTTGATATTGCTTAA
ATGAGTGAGTATTCGATAAAAATGCAAGAGGTTTTCAGTGTTGCTCAATACCAAGCAGCGCGTTTTGAAAGCCCATATTT
AGAAAGTTGGCACGTCCTTTTAGCTATGGTTGCTATCCATGACTCAGTCGCAGGGCTAACATTTGCGGAATACCAAACTA
AAATCGCCTATGAAGAATATGAAGCGGCAGCTGTTTTAGCCATTGGGAAATCACCGTTAACGGACGTTGACAGAGTTCAT
TTTGTAGAACAATCTAAAGCTCTTAGTGACGTTTTAGCATTTGCTGAGTCTATTTGTCAGGTGACTGGCGGTAACGAAAT
CGGGACAGAACACGTGCTTTATGCGATGTTGTTAAACCTTGATTTATTTGCCACACGTTTGCTAGAAGTTGCTGGTTTTA
AAAATAAAGAAGACGGTGACGCTGCTCGTTTGATTGATTTGCGTAAGAGTTTGGCACGTAATGCTGGTTTTACAAAGGAA
AATATCAAGGCTATTCATGGGCTTCGTAAGCCGAAAAAAGCGACAATGGGCGGTGCTTTTTCTGAAATGATGAAACCACA
GTCAACAGCGGGGGATTTGTCAGATTTCACGCGTGATTTGACAGAGATGGCAGGTCAAGGAAAATTAGAACCTGTTATCG
GTCGTGAAAAAGAAATTTCTCGTATGGTGCAGGTGCTTAGTCGCAAAACGAAAAACAATCCAGTTTTAGTAGGGGAAGCT
GGTGTTGGTAAAACGGCTCTTGCTTACGGTTTGGCACAGCGAATTGTCAATGGTGCGATTCCGTATGAACTCCAAGACAT
GCGTGTTTTAGAGCTTGATATGATGAGCGTTGTGGCTGGTACGCGATTCCGTGGTGATTTTGAAGAACGCATGAACCAAA
TCATCTCAGATATTGAGGAAGACGGTCATATTATTCTTTTCATTGACGAAGTGCATACGATTATGGGTTCAGGCTCTGGA
ATTGACAGCACTTTGGATGCGGCTAATATTCTAAAACCAGCGCTTGCGCGTGGTACGCTTCATATGGTTGGTGCGACAAC
GCAAGAAGAATATCAAAAACATCTTGAAAAAGATGCGGCGCTTTCTCGCCGTTTTGCTAAGATTACCATTGAAGAACCAA
GTGTTGAAGATGCTTACCAAATCTTGCTTGGGTTAAAGAAATCATATGAAGATTTTCATAATGTGGTGATTTCTGACGAA
GCTGTTTTAACGGCTGTCAAAGCTGCGCATCGCTATTTGACAAGTAAAAATCTTCCTGACTCAGCGATTGATTTGCTTGA
TGAAGCAAGTGCAACGGTTCAAGGTTTGGTGAAAAAAGAAGCGCCAGCTACTTTGACACCTGCTGATAAAGCTATTTTGG
AAGGTGATTTCAAATTGGCAACGAAATTGCTGAAAGAGTCACGCAAGAAGCCAAATCGTAAACCAACTGCTGTGACAGAA
GATGATATTATGGCAACGCTCAGTCGTTTGTCAGGTATTCCTGTTGAGAAAATGACACAGGCAGATAGTAAGAAATACTT
GAACCTTGAAAAAGAACTCCATAAGCGTGTGATTGGCCAAGATTCAGCTATTTCAGCGATTAGTCGTGCTATTCGTCGTA
ATCAAGCGGGCATTCGTACAGGCAAACGTCCGATTGGGTCGTTTATGTTCTTGGGTCCAACGGGTGTTGGTAAAACAGAG
TTGGCTAAAGCACTAGCAGAACTGCTATTTGATGATGAATCTGCTCTTATCCGTTTTGATATGTCTGAGTATATGGAAAA
ATTTGCGGCGAGTCGTCTTAACGGAGCTCCTCCAGGATATGTCGGTTACGAAGAAGGTGGCGAATTGACTGAAAAAGTTC
GCAACAAACCTTATTCTGTGCTTCTATTTGACGAAGTTGAAAAAGCCCACCCAGATATTTTCAATGTGCTTCTCCAAGTG
TTGGATGACGGTGTGCTGACGGATAGTCGTGGTCGTAAAGTTGATTTTTCAAACACGATTATCATCATGACATCAAATCT
TGGGGCAACCGCTTTGCGTGATGAAAAGACAGTTGGTTTTGGTGCGCGTGATATGGCTCATGATTATGAGGCAATGCAAA
AACGCATCATGGAAGAACTCAAAAAAGCTTACCGACCTGAATTCATCAACCGTATTGATGAAAAGGTTGTTTTCCACAAC
TTAACTCAAGAAAATATGCGTGATGTCGTGAAAATCATGGTTAAACCATTGATTGCGACACTAGCTGAAAAAGATATTAC
GCTAAAATTCCAACCATCAGCATTGAAATATTTAGCCGAAATTGGATACGACCCAGAAATGGGAGCTCGTCCGCTTCGCC
GTACTCTGCAAGATAAAGTTGAAGATGAATTATCAGAGCTTATTCTATCAGGCGAATTGGCAAGTGGAAATACCCTTAAA
ATCGGCGTTTCTAAAGGGAAACTCAAATTTGATATTGCTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Streptococcus mutans UA159 |
77.094 |
99.877 |
0.77 |
| clpC | Streptococcus thermophilus LMG 18311 |
73.62 |
100 |
0.738 |
| clpC | Streptococcus thermophilus LMD-9 |
73.497 |
100 |
0.737 |
| clpC | Streptococcus pneumoniae TIGR4 |
67.734 |
99.877 |
0.677 |
| clpC | Streptococcus pneumoniae Rx1 |
67.734 |
99.877 |
0.677 |
| clpC | Streptococcus pneumoniae D39 |
67.734 |
99.877 |
0.677 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
49.461 |
100 |
0.508 |
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
43.682 |
100 |
0.446 |
| clpE | Streptococcus pneumoniae TIGR4 |
45.639 |
78.967 |
0.36 |
| clpE | Streptococcus pneumoniae Rx1 |
45.639 |
78.967 |
0.36 |
| clpE | Streptococcus pneumoniae D39 |
45.639 |
78.967 |
0.36 |
| clpE | Streptococcus pneumoniae R6 |
45.639 |
78.967 |
0.36 |