Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   E8M05_RS02730 Genome accession   NZ_CP039457
Coordinates   487528..488613 (+) Length   361 a.a.
NCBI ID   WP_003063624.1    Uniprot ID   A0AAW6YLA3
Organism   Streptococcus pasteurianus strain WUSP067     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 482528..493613
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E8M05_RS02705 (E8M05_02700) asnA 483525..484517 (+) 993 WP_003063615.1 aspartate--ammonia ligase -
  E8M05_RS02710 (E8M05_02705) - 484651..485382 (-) 732 WP_003063617.1 hypothetical protein -
  E8M05_RS02715 (E8M05_02710) - 485544..486347 (-) 804 WP_061100178.1 hypothetical protein -
  E8M05_RS02720 (E8M05_02715) rsmD 486481..487020 (+) 540 WP_013851551.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  E8M05_RS02725 (E8M05_02720) coaD 487053..487550 (+) 498 WP_048791217.1 pantetheine-phosphate adenylyltransferase -
  E8M05_RS02730 (E8M05_02725) sepM 487528..488613 (+) 1086 WP_003063624.1 SepM family pheromone-processing serine protease Regulator
  E8M05_RS02735 (E8M05_02730) - 488742..488996 (+) 255 WP_003063626.1 DUF3923 family protein -
  E8M05_RS02745 (E8M05_02740) - 489299..490624 (+) 1326 WP_048791219.1 bifunctional UDP-sugar hydrolase/5'-nucleotidase -
  E8M05_RS02750 (E8M05_02745) - 490656..491234 (+) 579 WP_003063631.1 YutD-like domain-containing protein -
  E8M05_RS02755 (E8M05_02750) rlmN 491256..492362 (+) 1107 WP_136596403.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  E8M05_RS02760 (E8M05_02755) - 492362..492883 (+) 522 WP_003063633.1 VanZ family protein -

Sequence


Protein


Download         Length: 361 a.a.        Molecular weight: 39061.74 Da        Isoelectric Point: 4.0869

>NTDB_id=358783 E8M05_RS02730 WP_003063624.1 487528..488613(+) (sepM) [Streptococcus pasteurianus strain WUSP067]
MAILKRFKEILKKLGRILYRFKWWILGVVGIVFLLFSLLYPLDYYIEMPGGAYDIRSVLTVDNKEDDEDGSYNFVAVTVS
QATLAQLVYAWLTPYTEISTAADVTGGYSNADYLRINEYYMETSQNTATYQALTLAGKEATLDYQGVYVLNVSDNSTFKG
ILNISDTVTGVNGQTFNSSAELMAYVADLDLGSEVTVQYTSDGEAKEATGKIIELSNGKNGIGIGLVDHTSVSSDVDVNF
DTSGVGGPSAGLMFTLDIYDQLNSEDLRKGRKIAGTGTIESDGSVGDIGGAALKVVAAAKAGADIFFVPNNPVDEETLKK
DPDAKTNYEEAVAAAKDLDTDMKIVPVTTVQEAIDYLRNND

Nucleotide


Download         Length: 1086 bp        

>NTDB_id=358783 E8M05_RS02730 WP_003063624.1 487528..488613(+) (sepM) [Streptococcus pasteurianus strain WUSP067]
ATGGCAATCTTAAAAAGATTTAAAGAGATTTTGAAAAAGTTGGGTCGTATTTTATATCGCTTTAAGTGGTGGATATTAGG
TGTTGTAGGCATTGTTTTCTTACTATTTAGCTTGTTGTATCCGCTTGATTACTATATTGAAATGCCTGGTGGTGCTTATG
ATATTCGTAGCGTTTTAACGGTTGATAATAAGGAAGATGACGAAGATGGCTCTTATAATTTTGTGGCTGTCACGGTTAGT
CAGGCGACCTTGGCACAATTGGTTTATGCTTGGTTAACTCCCTACACAGAAATTTCGACAGCCGCAGATGTGACTGGTGG
TTATAGTAATGCTGATTATCTTCGTATCAATGAGTATTACATGGAAACCTCTCAGAATACAGCGACTTATCAAGCCTTAA
CATTGGCAGGAAAGGAAGCAACGCTTGATTATCAAGGGGTTTATGTTTTAAATGTTAGTGATAATTCGACGTTTAAAGGG
ATTTTGAATATCTCTGATACGGTAACTGGGGTTAACGGTCAGACATTTAACAGCTCGGCAGAATTAATGGCCTATGTGGC
TGATTTGGATTTAGGGTCTGAAGTAACTGTTCAATATACATCAGACGGCGAAGCAAAAGAAGCCACAGGAAAAATTATTG
AATTGTCAAATGGAAAAAATGGTATCGGAATCGGTTTGGTAGATCATACGTCGGTGTCATCAGATGTTGATGTTAATTTT
GATACGAGTGGTGTTGGTGGTCCAAGTGCTGGTTTGATGTTTACGCTTGATATTTATGACCAATTAAACAGTGAAGATTT
GCGTAAAGGTCGTAAAATTGCTGGTACAGGTACGATTGAATCAGATGGTTCAGTCGGGGATATTGGTGGCGCAGCACTTA
AAGTTGTTGCTGCTGCTAAAGCTGGTGCAGATATTTTCTTTGTTCCAAATAACCCTGTGGATGAGGAAACATTGAAAAAA
GACCCAGATGCGAAAACGAACTATGAAGAAGCTGTCGCAGCTGCTAAAGACCTCGATACCGATATGAAAATCGTTCCAGT
CACAACTGTTCAAGAAGCAATTGACTATCTGCGAAATAATGATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

67.742

94.46

0.64


Multiple sequence alignment