Detailed information    

insolico Bioinformatically predicted

Overview


Name   comQ   Type   Regulator
Locus tag   BAXH7_RS15245 Genome accession   NC_017191
Coordinates   2998967..2999842 (-) Length   291 a.a.
NCBI ID   WP_013353397.1    Uniprot ID   A0A9P1JJW3
Organism   Bacillus amyloliquefaciens XH7     
Function   modification of ComX; production of ComX (predicted from homology)   
Competence regulation

Genomic Context


Location: 2993967..3004842
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BAXH7_RS15210 (BAXH7_03214) - 2994155..2994631 (+) 477 WP_013353390.1 Na+/H+ antiporter subunit E -
  BAXH7_RS15215 (BAXH7_03215) - 2994631..2994915 (+) 285 WP_013353391.1 Na(+)/H(+) antiporter subunit F1 -
  BAXH7_RS15220 (BAXH7_03216) mnhG 2994899..2995273 (+) 375 WP_013353392.1 monovalent cation/H(+) antiporter subunit G -
  BAXH7_RS15225 (BAXH7_03217) - 2995313..2995696 (-) 384 WP_013353393.1 hotdog fold thioesterase -
  BAXH7_RS15230 (BAXH7_03218) comA 2995718..2996362 (-) 645 WP_014470899.1 response regulator transcription factor Regulator
  BAXH7_RS15235 - 2996443..2998749 (-) 2307 Protein_3036 sensor histidine kinase -
  BAXH7_RS15240 (BAXH7_03221) comX 2998772..2998948 (-) 177 WP_013353396.1 competence pheromone ComX -
  BAXH7_RS15245 (BAXH7_03222) comQ 2998967..2999842 (-) 876 WP_013353397.1 polyprenyl synthetase family protein Regulator
  BAXH7_RS15250 (BAXH7_03223) degQ 2999994..3000134 (-) 141 WP_013353398.1 degradation enzyme regulation protein DegQ Regulator
  BAXH7_RS15255 (BAXH7_03225) - 3000599..3000940 (+) 342 WP_013353399.1 hypothetical protein -
  BAXH7_RS15260 (BAXH7_03226) - 3000947..3002170 (-) 1224 WP_014470900.1 EAL and HDOD domain-containing protein -
  BAXH7_RS15265 (BAXH7_03227) - 3002300..3003766 (-) 1467 WP_014472199.1 nicotinate phosphoribosyltransferase -
  BAXH7_RS15270 (BAXH7_03228) - 3003784..3004335 (-) 552 WP_013353402.1 cysteine hydrolase family protein -
  BAXH7_RS15275 (BAXH7_03229) - 3004416..3004811 (-) 396 WP_013353403.1 YueI family protein -

Sequence


Protein


Download         Length: 291 a.a.        Molecular weight: 33461.48 Da        Isoelectric Point: 5.9224

>NTDB_id=35878 BAXH7_RS15245 WP_013353397.1 2998967..2999842(-) (comQ) [Bacillus amyloliquefaciens XH7]
MCLDAETIKGKMKEIVGDKVDNLHLEETLLTFINEKKHFSFGVLAFQHYVAFKGTHSSEITLLAAGIELLILAFDIFDDI
EDEDNFNKAWMQTDHAISLNAATSLYSISLQAICELESNIDFSRLAIKYALNAMQGQHNDLRNFPETEEECLHMIKQKSG
SLTAMSAVLGAMLASGEFNATIENYSYKIGVIKQIENDYYGLFDKSRSDIKKKKRTLINLFLNRQFNSASKKVLNMMNSK
NSYYSLISDRNYFEELLCKAGVRQYVLMLIKIYENEIYNEMEKLNIRIKLW

Nucleotide


Download         Length: 876 bp        

>NTDB_id=35878 BAXH7_RS15245 WP_013353397.1 2998967..2999842(-) (comQ) [Bacillus amyloliquefaciens XH7]
ATGTGTTTAGATGCCGAAACGATTAAAGGGAAGATGAAGGAAATTGTTGGGGATAAAGTCGATAATCTACATTTAGAAGA
GACTCTTTTGACCTTCATTAATGAAAAGAAGCACTTTTCATTCGGTGTCCTTGCTTTCCAGCATTATGTTGCTTTTAAGG
GTACACATTCCTCGGAAATCACACTACTGGCCGCTGGAATTGAACTTTTAATTTTAGCTTTTGATATTTTTGACGATATT
GAAGATGAAGATAACTTTAATAAGGCATGGATGCAAACTGACCATGCTATATCCCTGAATGCGGCTACTTCTCTGTATTC
AATAAGCCTGCAAGCCATTTGTGAGCTTGAATCAAACATCGATTTTTCAAGACTTGCAATAAAATATGCCCTAAATGCAA
TGCAAGGTCAGCATAATGATCTAAGAAATTTCCCGGAGACTGAAGAAGAGTGTTTACATATGATAAAACAGAAATCAGGA
TCGTTAACTGCAATGTCAGCTGTTTTAGGGGCGATGCTTGCAAGTGGTGAATTTAACGCAACAATTGAGAATTATTCTTA
TAAAATTGGCGTTATTAAACAAATTGAAAATGACTATTATGGTTTATTTGATAAAAGCCGTAGTGATATAAAGAAGAAGA
AAAGAACTTTGATAAACTTGTTTTTAAATCGTCAGTTTAATAGTGCCTCAAAAAAAGTTTTAAATATGATGAATTCTAAA
AACAGCTATTACTCTCTCATATCGGACAGAAATTATTTTGAAGAATTGCTGTGTAAAGCAGGAGTCAGACAATATGTTTT
AATGTTAATTAAAATATATGAAAATGAAATTTATAACGAAATGGAAAAGTTGAACATAAGAATTAAACTATGGTGA

Domains


Predicted by InterProScan.

(44-238)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A9P1JJW3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comQ Bacillus subtilis subsp. subtilis str. 168

46.182

94.502

0.436


Multiple sequence alignment