Detailed information NTG0035876

Bioinformatically predicted

Overview

• Name: rapC
• Type: Regulator
• Locus tag: BAXH7_RS14730
• Genome accession: NC_017191
• Coordinates: 2904270..2905400 (-)
• Length: 376 a.a.
• NCBI ID: WP_013353308.1
• Uniprot ID: A0A9P1JJI8
• Organism: Bacillus amyloliquefaciens XH7
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 2899270..2910400

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
BAXH7_RS14700 (BAXH7_03108)	-	2899485..2900153 (+)	669	WP_013353302.1	TrkA family potassium uptake protein	-
BAXH7_RS14705 (BAXH7_03109)	-	2900177..2901022 (-)	846	WP_013353303.1	glucosaminidase domain-containing protein	-
BAXH7_RS14710 (BAXH7_03111)	hmpA	2901162..2902337 (-)	1176	WP_013353304.1	NO-inducible flavohemoprotein	-
BAXH7_RS14715	-	2902554..2903194 (+)	641	Protein_2932	cupin domain-containing protein	-
BAXH7_RS14720 (BAXH7_03114)	-	2903254..2903577 (-)	324	WP_013353306.1	hypothetical protein	-
BAXH7_RS14730 (BAXH7_03117)	rapC	2904270..2905400 (-)	1131	WP_013353308.1	tetratricopeptide repeat protein	Regulator
BAXH7_RS14735	-	2905788..2905991 (+)	204	WP_014470862.1	hypothetical protein	-
BAXH7_RS14750 (BAXH7_03120)	-	2908684..2909079 (-)	396	WP_013353310.1	hypothetical protein	-
BAXH7_RS14755 (BAXH7_03121)	-	2909069..2909482 (-)	414	WP_013353311.1	hypothetical protein	-
BAXH7_RS14760 (BAXH7_03122)	-	2909668..2909892 (+)	225	WP_014470866.1	helix-turn-helix transcriptional regulator	-
BAXH7_RS14765 (BAXH7_03123)	-	2910015..2910317 (+)	303	WP_014470867.1	hypothetical protein	-

Sequence

Protein

• Length: 376 a.a.
• Molecular weight: 44372.86 Da
• Isoelectric Point: 6.5099

>NTDB_id=35876 BAXH7_RS14730 WP_013353308.1 2904270..2905400(-) (rapC) [Bacillus amyloliquefaciens XH7]
MSPVLPSSEVGVKINEWYKMIRQFSVPDAEILKAEVEQEINEMEEDEYLLIYYSLMKFRHQLMLDYLEPVTVRVRPTIDE
LLEKIEASNKGISGLLCYYSLFFRGMYEFDQKQYVKAIGFYREAEKQLIHVHDEIERAEFHFKLAEAYYGMKQSHVSMHH
VKQALDIYDQYELYKVRKIQCLFVISGNYVDFKRYEKSLPHLEKALELSKQVNNNERLLSSAYYNIGKNYGDLEEYSKAE
IYLKKAAEISEKYKLGNLPHSLFTYAKLLFKQGKTSEAIQISKKGLSSAIYQGDKLFESLQKYLEALYINAIDQMGIKKT
IDYLEKNKNYSYVEDIALDTAAVYAESKQYDKSYIYHQKMIQTQKQIQRGECLYEF

Nucleotide

• Length: 1131 bp

>NTDB_id=35876 BAXH7_RS14730 WP_013353308.1 2904270..2905400(-) (rapC) [Bacillus amyloliquefaciens XH7]
GTGAGTCCTGTTTTACCATCATCGGAGGTTGGCGTTAAGATTAATGAATGGTACAAAATGATACGTCAGTTCAGTGTTCC
GGATGCGGAGATTTTGAAAGCGGAAGTGGAACAAGAGATAAACGAGATGGAAGAAGACGAGTATTTACTAATATATTATT
CTCTCATGAAATTCCGCCATCAACTCATGCTTGATTATTTAGAGCCGGTAACTGTCAGAGTCCGACCGACAATCGACGAG
TTGCTGGAAAAAATCGAAGCATCAAATAAAGGCATTTCCGGCCTGCTGTGCTATTATTCTTTATTTTTTCGCGGCATGTA
TGAATTTGATCAGAAGCAGTATGTAAAGGCGATCGGCTTTTATAGAGAGGCTGAAAAACAACTCATTCATGTGCATGATG
AAATTGAGAGAGCGGAGTTTCATTTTAAACTGGCTGAAGCATATTACGGTATGAAACAAAGCCACGTCTCCATGCATCAC
GTAAAGCAAGCGCTCGATATTTACGATCAGTATGAGTTGTATAAAGTCCGGAAAATTCAATGTCTGTTCGTCATATCTGG
GAATTATGTTGACTTTAAACGTTATGAAAAAAGTTTGCCGCATTTAGAAAAAGCTTTAGAGTTGTCGAAACAAGTAAACA
ATAATGAAAGGCTGCTCAGTTCTGCTTATTACAACATAGGAAAGAATTACGGAGACTTAGAAGAATACAGTAAAGCTGAA
ATCTACTTAAAAAAAGCAGCGGAGATTTCTGAAAAGTATAAATTGGGCAACCTTCCGCATTCCTTGTTTACATACGCAAA
GCTTCTATTTAAACAAGGGAAAACAAGCGAGGCGATTCAAATCAGCAAAAAAGGACTTTCATCAGCTATATATCAAGGGG
ATAAGCTGTTTGAATCTCTGCAAAAATATTTGGAGGCTTTATACATTAACGCAATAGACCAAATGGGAATCAAAAAAACA
ATTGATTACCTTGAGAAAAATAAAAACTATTCGTATGTAGAAGATATTGCTCTTGATACGGCTGCTGTTTATGCAGAGTC
AAAGCAATATGACAAATCATATATTTATCATCAAAAAATGATTCAAACGCAAAAACAAATTCAGAGGGGAGAATGCCTGT
ATGAATTTTAG

Domains

Predicted by InterProScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (5-65)

• Tetratricopeptide repeat (TPR_12) (193-252)

3D structure

• AlphaFold DB: A0A9P1JJI8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapC	Bacillus subtilis subsp. subtilis str. 168	44.591	100	0.449
rapF	Bacillus subtilis subsp. subtilis str. 168	40.633	100	0.41