Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   BAXH7_RS14315 Genome accession   NC_017191
Coordinates   2844317..2845012 (-) Length   231 a.a.
NCBI ID   WP_014472631.1    Uniprot ID   -
Organism   Bacillus amyloliquefaciens XH7     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 2839317..2850012
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BAXH7_RS14295 (BAXH7_03044) - 2839698..2840417 (-) 720 WP_014470840.1 TIGR02206 family membrane protein -
  BAXH7_RS14300 (BAXH7_03045) - 2840524..2842464 (-) 1941 WP_014470841.1 ABC transporter permease -
  BAXH7_RS14305 (BAXH7_03046) - 2842457..2843216 (-) 760 Protein_2873 ABC transporter ATP-binding protein -
  BAXH7_RS14310 (BAXH7_03047) - 2843320..2844324 (-) 1005 WP_014470842.1 HAMP domain-containing sensor histidine kinase -
  BAXH7_RS14315 (BAXH7_03048) braR 2844317..2845012 (-) 696 WP_014472631.1 response regulator transcription factor Regulator
  BAXH7_RS14320 (BAXH7_03049) - 2845080..2846393 (-) 1314 WP_013353253.1 ABC transporter permease -
  BAXH7_RS14325 (BAXH7_03050) - 2846383..2847078 (-) 696 WP_013353254.1 ABC transporter ATP-binding protein -
  BAXH7_RS14330 (BAXH7_03051) - 2847094..2848074 (-) 981 WP_014470843.1 hypothetical protein -
  BAXH7_RS14335 (BAXH7_03052) - 2848111..2849097 (-) 987 WP_013353256.1 ABC transporter permease -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26789.87 Da        Isoelectric Point: 6.3906

>NTDB_id=35875 BAXH7_RS14315 WP_014472631.1 2844317..2845012(-) (braR) [Bacillus amyloliquefaciens XH7]
MFHILLIEDDNTLFHEMKERLTGWSFAVHGIKDFSRVTREFTEIKPDLVMIDVQLPKFDGFHWCRMIRSQSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAVFRRGYQYNAEPALIKRWSGAAIDAETNMVSHENGSVELTKNEMLI
LKLLAEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLDQLGIGKMIETKVGQGYIAKEEDGLYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=35875 BAXH7_RS14315 WP_014472631.1 2844317..2845012(-) (braR) [Bacillus amyloliquefaciens XH7]
ATGTTTCATATTTTGTTAATAGAAGATGATAACACTTTGTTTCACGAGATGAAAGAGAGATTAACGGGCTGGTCATTTGC
GGTGCACGGGATAAAGGATTTCAGCCGGGTTACCCGGGAATTTACCGAAATCAAGCCCGATTTGGTGATGATTGATGTGC
AGCTGCCGAAATTTGACGGCTTTCATTGGTGCAGAATGATACGCTCCCAATCAAACGTGCCGATTCTGTTTTTGTCCTCG
CGGGATCATCCCGCAGATATGGTCATGTCGATGCAGCTCGGAGCAGATGATTTCATTCAGAAGCCTTTTCATTTTGACGT
CTTGATTGCTAAAATACAAGCCGTGTTTCGGCGGGGGTATCAATACAATGCAGAACCGGCGCTCATCAAAAGGTGGAGCG
GGGCTGCCATTGATGCTGAAACAAACATGGTGAGCCATGAAAACGGTTCAGTTGAGCTGACCAAAAACGAAATGCTGATT
TTAAAACTGCTGGCCGAGCAGAAAAATAAAATCGTCAGCCGCGAAGAACTCATCAGAAGCTTGTGGAATGATGAGCGTTT
CGTCAGTGATAACACGCTGACGGTGAATGTCAATCGGCTGCGGAAAAAACTTGATCAATTAGGCATCGGGAAGATGATTG
AAACCAAAGTGGGGCAGGGGTACATCGCGAAGGAAGAAGACGGTCTTTATGATTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)

Response regulator receiver domain (Response_reg)

(4-113)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

41.096

94.805

0.39

Multiple sequence alignment