Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   FBF69_RS16985 Genome accession   NZ_CP039453
Coordinates   3464718..3465344 (-) Length   208 a.a.
NCBI ID   WP_136486215.1    Uniprot ID   -
Organism   Enterobacter bugandensis strain 220     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 3459718..3470344
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FBF69_RS16970 (FAI36_16975) helD 3459955..3462009 (-) 2055 WP_045261704.1 DNA helicase IV -
  FBF69_RS16975 (FAI36_16980) - 3462133..3462579 (+) 447 WP_041910601.1 YccF domain-containing protein -
  FBF69_RS16980 (FAI36_16985) yccS 3462599..3464761 (+) 2163 WP_041910602.1 YccS family putative transporter -
  FBF69_RS16985 (FAI36_16990) sxy/tfoX 3464718..3465344 (-) 627 WP_136486215.1 TfoX/Sxy family DNA transformation protein Regulator
  FBF69_RS16990 (FAI36_16995) sulA 3465562..3466071 (+) 510 WP_041910604.1 SOS-induced cell division inhibitor SulA -
  FBF69_RS16995 (FAI36_17000) ompA 3466426..3467481 (+) 1056 WP_108780329.1 porin OmpA -
  FBF69_RS17000 (FAI36_17005) matP 3467546..3467998 (-) 453 WP_023332611.1 macrodomain Ter protein MatP -
  FBF69_RS17005 (FAI36_17010) - 3468184..3469944 (+) 1761 WP_136486217.1 AAA family ATPase -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23961.58 Da        Isoelectric Point: 9.2151

>NTDB_id=358745 FBF69_RS16985 WP_136486215.1 3464718..3465344(-) (sxy/tfoX) [Enterobacter bugandensis strain 220]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDDAVFAMVSEGELYLRACEESAKYCVKNAASFLTLMKRGRPVLLN
YYRVDDGLWQDRERLLQLSTFALNAARKERYQRHQRNRLKDLPNLTFQLEVLLFEAGITNEETLRALGARESWLKMRAKN
KALSIKVLFALEGAIEGLHEAALPAGIRRELTEWFNALPEPLESHSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=358745 FBF69_RS16985 WP_136486215.1 3464718..3465344(-) (sxy/tfoX) [Enterobacter bugandensis strain 220]
ATGAAAAAGATATCTTATGAACGGATTTATAAATCCCAGGAATACCTGTCACCACTGGGTGAAATTCATCATCGCGCGCT
GTTCGGCGGCTATACCCTGGCAGTGGATGATGCGGTTTTTGCCATGGTGTCAGAAGGTGAGCTCTACCTCCGTGCCTGTG
AAGAAAGTGCGAAATACTGTGTGAAAAATGCCGCGTCTTTTTTGACCCTGATGAAGCGGGGCCGTCCGGTGCTTCTCAAC
TATTACCGGGTGGATGACGGGCTATGGCAGGACAGGGAGCGTCTGCTTCAGCTCTCCACTTTCGCACTTAATGCGGCAAG
AAAAGAGCGTTACCAGCGGCATCAGCGCAATCGACTTAAGGACCTGCCAAACCTGACCTTTCAGCTGGAAGTGCTGCTCT
TTGAAGCGGGCATTACCAACGAAGAAACGCTGCGGGCGCTTGGCGCAAGGGAGAGCTGGCTGAAGATGCGGGCGAAAAAT
AAAGCGCTGAGTATCAAAGTGCTATTCGCACTGGAAGGGGCGATTGAGGGGCTGCATGAGGCGGCACTCCCGGCCGGCAT
TCGCCGGGAGTTGACGGAGTGGTTTAATGCGCTGCCTGAGCCACTGGAGAGTCACTCCTCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.081

95.192

0.553

Multiple sequence alignment