Detailed information    

insolico Bioinformatically predicted

Overview

Name   sxy/tfoX   Type   Regulator
Locus tag   FBF68_RS21735 Genome accession   NZ_CP039452
Coordinates   4486068..4486694 (-) Length   208 a.a.
NCBI ID   WP_041910603.1    Uniprot ID   A0A8E1RPS6
Organism   Enterobacter bugandensis strain 1367     
Function   positive regulator of competence gene (predicted from homology)   
Competence regulation

Genomic Context

Location: 4481068..4491694
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FBF68_RS21720 (FAI37_21725) helD 4481305..4483359 (-) 2055 WP_045261704.1 DNA helicase IV -
  FBF68_RS21725 (FAI37_21730) - 4483483..4483929 (+) 447 WP_041910601.1 YccF domain-containing protein -
  FBF68_RS21730 (FAI37_21735) yccS 4483949..4486111 (+) 2163 WP_045261705.1 YccS family putative transporter -
  FBF68_RS21735 (FAI37_21740) sxy/tfoX 4486068..4486694 (-) 627 WP_041910603.1 TfoX/Sxy family DNA transformation protein Regulator
  FBF68_RS21740 (FAI37_21745) sulA 4486912..4487421 (+) 510 WP_041910604.1 SOS-induced cell division inhibitor SulA -
  FBF68_RS21745 (FAI37_21750) ompA 4487776..4488831 (+) 1056 WP_108780329.1 porin OmpA -
  FBF68_RS21750 (FAI37_21755) matP 4488895..4489347 (-) 453 WP_023332611.1 macrodomain Ter protein MatP -
  FBF68_RS21755 (FAI37_21760) - 4489533..4491293 (+) 1761 WP_063154543.1 Lon protease family protein -

Sequence

Protein


Download         Length: 208 a.a.        Molecular weight: 23988.61 Da        Isoelectric Point: 9.2151

>NTDB_id=358724 FBF68_RS21735 WP_041910603.1 4486068..4486694(-) (sxy/tfoX) [Enterobacter bugandensis strain 1367]
MKKISYERIYKSQEYLSPLGEIHHRALFGGYTLAVDDAVFAMVSEGELYLRACEESAKYCVKNAASFLTLMKRGRPVLLN
YYRVDDGLWQDRERLLQLSTFALNAARKERYQRHQRNRLKDLPNLTFQLEVLLFEAGITNEETLRALGARESWLKMRAKN
KALSIKVLFALEGAIEGLHEAALPAGIRRELTEWFNALPEPLENHSSR

Nucleotide


Download         Length: 627 bp        

>NTDB_id=358724 FBF68_RS21735 WP_041910603.1 4486068..4486694(-) (sxy/tfoX) [Enterobacter bugandensis strain 1367]
ATGAAAAAGATATCTTATGAACGGATTTATAAATCCCAGGAATACCTGTCACCACTGGGTGAAATTCATCATCGCGCGCT
GTTCGGCGGCTATACCCTGGCAGTGGATGATGCGGTTTTTGCCATGGTGTCAGAAGGTGAGCTCTACCTCCGTGCCTGTG
AAGAAAGTGCGAAATACTGTGTGAAAAATGCTGCGTCTTTTTTGACCCTGATGAAGCGGGGCCGTCCGGTGCTTCTCAAC
TATTACCGGGTGGATGACGGGCTATGGCAGGACAGGGAGCGTCTGCTTCAGCTCTCCACTTTCGCACTTAATGCGGCAAG
AAAAGAGCGTTACCAGCGGCATCAGCGCAATCGACTTAAGGACCTGCCAAACCTGACCTTTCAGCTGGAAGTGTTGCTCT
TTGAAGCGGGCATCACCAACGAAGAAACGCTGCGGGCGCTTGGCGCAAGGGAGAGCTGGCTGAAGATGCGGGCGAAAAAT
AAAGCGCTGAGTATCAAAGTGCTATTCGCGCTAGAAGGGGCGATCGAGGGGCTGCATGAGGCGGCACTCCCGGCCGGCAT
TCGCCGGGAGTTGACGGAGTGGTTTAATGCGCTGCCTGAGCCACTGGAGAATCACTCCTCCAGGTAG

Domains

Predicted by InterproScan.

TfoX C-terminal domain (TfoX_C)

(116-194)

TfoX N-terminal domain (TfoX_N)

(14-106)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sxy/tfoX Escherichia coli BW25113 strain K-12

58.081

95.192

0.553

Multiple sequence alignment