Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   E5843_RS11470 Genome accession   NZ_CP039383
Coordinates   2463395..2463796 (-) Length   133 a.a.
NCBI ID   WP_129136621.1    Uniprot ID   A0A4Z1R7W7
Organism   Luteimonas yindakuii strain S-1072     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2458395..2468796
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E5843_RS11455 (E5843_11990) - 2460401..2462422 (-) 2022 WP_134674060.1 methyl-accepting chemotaxis protein -
  E5843_RS11460 (E5843_11995) - 2462455..2463009 (-) 555 WP_134674061.1 chemotaxis protein CheW -
  E5843_RS11465 (E5843_12000) - 2463006..2463377 (-) 372 WP_134674062.1 response regulator -
  E5843_RS11470 (E5843_12005) pilG 2463395..2463796 (-) 402 WP_129136621.1 twitching motility response regulator PilG Regulator
  E5843_RS11475 (E5843_12010) gshB 2463997..2464968 (+) 972 WP_136412694.1 glutathione synthase -
  E5843_RS11480 (E5843_12015) - 2465087..2465959 (+) 873 WP_141066008.1 energy transducer TonB -
  E5843_RS11485 (E5843_12020) lepB 2466055..2466684 (-) 630 WP_136412696.1 signal peptidase I -
  E5843_RS11490 (E5843_12025) tsaB 2466737..2467435 (-) 699 WP_136412697.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -
  E5843_RS11495 (E5843_12030) - 2467517..2468044 (-) 528 WP_136412698.1 hypothetical protein -

Sequence

Protein


Download         Length: 133 a.a.        Molecular weight: 14992.35 Da        Isoelectric Point: 8.9749

>NTDB_id=358407 E5843_RS11470 WP_129136621.1 2463395..2463796(-) (pilG) [Luteimonas yindakuii strain S-1072]
MTQDEKRAGSLDGLRVMVIDDSKTIRRTAETLLKREGAEVVTAVDGFEALAKIADHKPQIIFVDIMMPRLDGYQTCALIK
NNQVFRQTPVIMLSSKDGLFDKARGRIVGSEQYVTKPFTREELLDAIRKHVNT

Nucleotide


Download         Length: 402 bp        

>NTDB_id=358407 E5843_RS11470 WP_129136621.1 2463395..2463796(-) (pilG) [Luteimonas yindakuii strain S-1072]
ATGACGCAGGACGAGAAACGCGCCGGGAGCCTGGACGGCTTGCGGGTGATGGTGATCGACGACTCGAAAACCATCCGCAG
GACCGCCGAGACCCTGCTCAAGCGCGAAGGTGCCGAGGTGGTGACCGCGGTCGACGGCTTCGAGGCATTGGCCAAGATCG
CCGACCACAAGCCGCAGATCATCTTCGTCGACATCATGATGCCCAGGCTCGACGGGTATCAGACCTGCGCGCTGATCAAG
AACAACCAGGTCTTCCGGCAGACGCCGGTGATCATGCTGTCATCCAAGGACGGGCTGTTCGACAAGGCACGCGGGCGCAT
CGTCGGCTCCGAGCAGTACGTCACCAAGCCGTTCACGCGCGAGGAACTCCTCGACGCGATCCGCAAGCACGTCAACACCT
GA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(16-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4Z1R7W7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

73.387

93.233

0.684

Multiple sequence alignment