Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   SB21_RS19860 Genome accession   NZ_CP039380
Coordinates   348078..348242 (+) Length   54 a.a.
NCBI ID   WP_269195032.1    Uniprot ID   -
Organism   Bacillus velezensis strain LPL-K103     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 343078..353242
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SB21_RS19855 srfAB 344969..348061 (+) 3093 Protein_315 surfactin non-ribosomal peptide synthetase SrfAB -
  SB21_RS19860 comS 348078..348242 (+) 165 WP_269195032.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 54 a.a.        Molecular weight: 6180.18 Da        Isoelectric Point: 12.0559

>NTDB_id=358380 SB21_RS19860 WP_269195032.1 348078..348242(+) (comS) [Bacillus velezensis strain LPL-K103]
MRARRNSSLNRSDKRLIRSIILFPQHSAGCISLISSDRPARATTSLLYFCWKGQ

Nucleotide


Download         Length: 165 bp        

>NTDB_id=358380 SB21_RS19860 WP_269195032.1 348078..348242(+) (comS) [Bacillus velezensis strain LPL-K103]
ATGAGAGCGAGGAGGAACAGCAGTTTGAACCGATCCGACAAGCGCCTTATCAGGAGCATTATCCTGTTTCCTCAGCACAG
CGCAGGATGTATATCCTTAATCAGCTCGGACAGGCCAGCACGAGCTACAACGTCCCTGCTGTACTTCTGCTGGAAGGGTC
AGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(9-52)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

61.364

81.481

0.5

Multiple sequence alignment