Detailed information
Bioinformatically predicted
Overview
| Name | sepM | Type | Regulator |
| Locus tag | GRT08_RS07755 | Genome accession | NZ_CP047234 |
| Coordinates | 1512664..1513686 (+) | Length | 340 a.a. |
| NCBI ID | WP_071391872.1 | Uniprot ID | - |
| Organism | Bacillus amyloliquefaciens strain FJ4 | ||
| Function | processing of CSP (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1507664..1518686
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GRT08_RS07715 (GRT08_07600) | - | 1508023..1508262 (+) | 240 | WP_003154475.1 | YlbE-like family protein | - |
| GRT08_RS07720 (GRT08_07605) | ylbF | 1508333..1508782 (+) | 450 | WP_003154472.1 | YlbF family regulator | Regulator |
| GRT08_RS07725 (GRT08_07610) | - | 1508841..1509113 (+) | 273 | WP_071392581.1 | YlbG family protein | - |
| GRT08_RS07730 (GRT08_07615) | - | 1509204..1509413 (+) | 210 | WP_071391874.1 | hypothetical protein | - |
| GRT08_RS07735 (GRT08_07620) | rsmD | 1509413..1509967 (+) | 555 | WP_007409693.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| GRT08_RS07740 (GRT08_07625) | coaD | 1509972..1510454 (+) | 483 | WP_003154467.1 | pantetheine-phosphate adenylyltransferase | - |
| GRT08_RS07745 (GRT08_07630) | ylbJ | 1510473..1511699 (-) | 1227 | WP_003154466.1 | sporulation integral membrane protein YlbJ | - |
| GRT08_RS07750 (GRT08_07635) | - | 1511879..1512658 (+) | 780 | WP_015388274.1 | patatin family protein | - |
| GRT08_RS07755 (GRT08_07640) | sepM | 1512664..1513686 (+) | 1023 | WP_071391872.1 | SepM family pheromone-processing serine protease | Regulator |
| GRT08_RS07760 (GRT08_07645) | - | 1513705..1514952 (-) | 1248 | WP_377803127.1 | nucleotidyltransferase | - |
| GRT08_RS07765 (GRT08_07650) | - | 1515161..1515679 (+) | 519 | WP_003154459.1 | DUF177 domain-containing protein | - |
| GRT08_RS07770 (GRT08_07655) | rpmF | 1515701..1515880 (+) | 180 | WP_003154457.1 | 50S ribosomal protein L32 | - |
| GRT08_RS07775 (GRT08_07660) | gerR | 1516038..1516613 (+) | 576 | WP_003154450.1 | sporulation-specific transcriptional regulator GerR | - |
| GRT08_RS07780 (GRT08_07665) | - | 1516655..1517137 (-) | 483 | WP_015388272.1 | N-acetyltransferase | - |
| GRT08_RS07785 (GRT08_07670) | - | 1517300..1518181 (+) | 882 | WP_071391870.1 | 2-dehydropantoate 2-reductase | - |
Sequence
Protein
Download Length: 340 a.a. Molecular weight: 37433.00 Da Isoelectric Point: 7.3848
>NTDB_id=358335 GRT08_RS07755 WP_071391872.1 1512664..1513686(+) (sepM) [Bacillus amyloliquefaciens strain FJ4]
MKAKHFRWVFIILILLIAVTFIKLPYYITQPGEASELRPLIKVDGGYPEKGSLSLMTVKVGPANPYTYLWAKVHPYDEIV
PDESIKEEGESDSDYMKRQLQMMKSSQENAVIAAYQKAGKQVKYSFNGIFASSVVSDMPAKGKIEVGDKIISADGKTYES
AEKLIDYISSKKAGEKVTFHIERDTKEKTVDIVLKSFPEDPKRAGIGVALYTDRNVKVKPDLHFSIENIGGPSAGLMMSL
EIYNQLTKPDETKGYNIAGTGTIDVDGKVGPIGGIDQKVVAADKAGKDIFFAPNQNGAENSDYKNAVKTAKAIKSDMKIV
PVDTMQDALDYLDQLKVKST
MKAKHFRWVFIILILLIAVTFIKLPYYITQPGEASELRPLIKVDGGYPEKGSLSLMTVKVGPANPYTYLWAKVHPYDEIV
PDESIKEEGESDSDYMKRQLQMMKSSQENAVIAAYQKAGKQVKYSFNGIFASSVVSDMPAKGKIEVGDKIISADGKTYES
AEKLIDYISSKKAGEKVTFHIERDTKEKTVDIVLKSFPEDPKRAGIGVALYTDRNVKVKPDLHFSIENIGGPSAGLMMSL
EIYNQLTKPDETKGYNIAGTGTIDVDGKVGPIGGIDQKVVAADKAGKDIFFAPNQNGAENSDYKNAVKTAKAIKSDMKIV
PVDTMQDALDYLDQLKVKST
Nucleotide
Download Length: 1023 bp
>NTDB_id=358335 GRT08_RS07755 WP_071391872.1 1512664..1513686(+) (sepM) [Bacillus amyloliquefaciens strain FJ4]
ATGAAAGCAAAACATTTTCGCTGGGTGTTTATCATCCTGATCTTATTAATTGCAGTTACATTTATTAAGCTTCCGTATTA
CATTACACAGCCGGGAGAAGCATCAGAGCTGAGACCGCTGATTAAGGTGGACGGAGGCTATCCTGAAAAAGGAAGCCTTT
CCTTGATGACTGTCAAAGTAGGCCCCGCCAATCCGTATACATATCTTTGGGCGAAAGTGCATCCTTACGATGAAATCGTC
CCTGATGAAAGCATAAAAGAAGAGGGCGAATCGGACTCGGATTATATGAAGCGCCAGCTGCAAATGATGAAAAGCTCCCA
AGAAAACGCGGTCATTGCCGCTTATCAAAAAGCCGGGAAACAGGTGAAATACTCATTTAACGGGATTTTCGCCAGCTCAG
TCGTCTCTGACATGCCGGCAAAAGGAAAAATAGAGGTCGGTGATAAAATCATCAGCGCGGACGGGAAAACATACGAATCC
GCTGAAAAGCTGATTGATTATATCAGCAGCAAAAAAGCGGGGGAGAAAGTAACGTTTCACATTGAACGGGACACGAAAGA
AAAGACCGTTGACATTGTGCTGAAATCATTCCCGGAAGACCCGAAAAGAGCGGGAATCGGCGTCGCGTTATATACGGATC
GGAACGTGAAAGTAAAGCCGGATCTTCATTTCAGCATTGAAAACATCGGCGGGCCTTCTGCGGGTCTCATGATGTCTTTA
GAAATTTACAATCAGCTGACAAAACCTGACGAAACAAAAGGCTATAATATAGCCGGAACGGGAACAATCGACGTGGACGG
CAAGGTCGGACCGATCGGCGGAATCGATCAGAAAGTCGTCGCCGCAGACAAAGCGGGAAAAGATATTTTCTTTGCGCCGA
ATCAAAACGGAGCTGAAAATTCTGATTACAAAAATGCGGTAAAAACGGCGAAAGCAATCAAGTCCGATATGAAGATCGTC
CCTGTCGACACCATGCAGGACGCACTTGACTATTTGGATCAGCTGAAAGTAAAAAGCACCTGA
ATGAAAGCAAAACATTTTCGCTGGGTGTTTATCATCCTGATCTTATTAATTGCAGTTACATTTATTAAGCTTCCGTATTA
CATTACACAGCCGGGAGAAGCATCAGAGCTGAGACCGCTGATTAAGGTGGACGGAGGCTATCCTGAAAAAGGAAGCCTTT
CCTTGATGACTGTCAAAGTAGGCCCCGCCAATCCGTATACATATCTTTGGGCGAAAGTGCATCCTTACGATGAAATCGTC
CCTGATGAAAGCATAAAAGAAGAGGGCGAATCGGACTCGGATTATATGAAGCGCCAGCTGCAAATGATGAAAAGCTCCCA
AGAAAACGCGGTCATTGCCGCTTATCAAAAAGCCGGGAAACAGGTGAAATACTCATTTAACGGGATTTTCGCCAGCTCAG
TCGTCTCTGACATGCCGGCAAAAGGAAAAATAGAGGTCGGTGATAAAATCATCAGCGCGGACGGGAAAACATACGAATCC
GCTGAAAAGCTGATTGATTATATCAGCAGCAAAAAAGCGGGGGAGAAAGTAACGTTTCACATTGAACGGGACACGAAAGA
AAAGACCGTTGACATTGTGCTGAAATCATTCCCGGAAGACCCGAAAAGAGCGGGAATCGGCGTCGCGTTATATACGGATC
GGAACGTGAAAGTAAAGCCGGATCTTCATTTCAGCATTGAAAACATCGGCGGGCCTTCTGCGGGTCTCATGATGTCTTTA
GAAATTTACAATCAGCTGACAAAACCTGACGAAACAAAAGGCTATAATATAGCCGGAACGGGAACAATCGACGTGGACGG
CAAGGTCGGACCGATCGGCGGAATCGATCAGAAAGTCGTCGCCGCAGACAAAGCGGGAAAAGATATTTTCTTTGCGCCGA
ATCAAAACGGAGCTGAAAATTCTGATTACAAAAATGCGGTAAAAACGGCGAAAGCAATCAAGTCCGATATGAAGATCGTC
CCTGTCGACACCATGCAGGACGCACTTGACTATTTGGATCAGCTGAAAGTAAAAAGCACCTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sepM | Streptococcus mutans UA159 |
38.953 |
100 |
0.394 |