Detailed information
Bioinformatically predicted
Overview
| Name | comK | Type | Regulator |
| Locus tag | SB21_RS05490 | Genome accession | NZ_CP039380 |
| Coordinates | 1044542..1045120 (+) | Length | 192 a.a. |
| NCBI ID | WP_003155179.1 | Uniprot ID | G1BIW7 |
| Organism | Bacillus velezensis strain LPL-K103 | ||
| Function | activate transcription of late competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1039542..1050120
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SB21_RS05470 (SB21_05470) | - | 1040045..1041337 (-) | 1293 | WP_007409192.1 | globin-coupled sensor protein | - |
| SB21_RS05475 (SB21_05475) | - | 1041459..1042982 (-) | 1524 | WP_039062807.1 | FAD-dependent oxidoreductase | - |
| SB21_RS05480 (SB21_05480) | - | 1043107..1043964 (+) | 858 | WP_007610477.1 | SDR family oxidoreductase | - |
| SB21_RS05485 (SB21_05485) | - | 1043994..1044227 (-) | 234 | WP_007409189.1 | IDEAL domain-containing protein | - |
| SB21_RS05490 (SB21_05490) | comK | 1044542..1045120 (+) | 579 | WP_003155179.1 | competence protein ComK | Regulator |
| SB21_RS05495 (SB21_05495) | - | 1045266..1045634 (+) | 369 | WP_012117235.1 | iron chaperone | - |
| SB21_RS05500 (SB21_05500) | - | 1045661..1046032 (+) | 372 | WP_007409186.1 | iron chaperone | - |
| SB21_RS05505 (SB21_05505) | - | 1046158..1047308 (+) | 1151 | WP_094246999.1 | IS3 family transposase | - |
| SB21_RS05510 (SB21_05510) | - | 1047369..1048580 (-) | 1212 | WP_007409185.1 | GNAT family N-acetyltransferase | - |
| SB21_RS05515 (SB21_05515) | - | 1048737..1049447 (-) | 711 | WP_007409183.1 | YrpD family protein | - |
| SB21_RS05520 (SB21_05520) | - | 1049643..1049912 (+) | 270 | WP_003155168.1 | excalibur calcium-binding domain-containing protein | - |
Sequence
Protein
Download Length: 192 a.a. Molecular weight: 22315.58 Da Isoelectric Point: 8.1419
>NTDB_id=358324 SB21_RS05490 WP_003155179.1 1044542..1045120(+) (comK) [Bacillus velezensis strain LPL-K103]
MCQKTHAPLESYEVNRSTIAVLPEEIDGKMGSKVIEKDCILYVSMKPIHIIDRSCRYFGSSYAGRKAGTYEAIKISHKPP
IMVDPSNHIFLFPTLSSARPQCGWISHVHVKDFQPTAFDDTAVTFSNGKTMELEVSYHSFENQVYRTAYLRTTFQDRMGS
HIPKRQEFMLYPKEERTRMIYDFILRELGERY
MCQKTHAPLESYEVNRSTIAVLPEEIDGKMGSKVIEKDCILYVSMKPIHIIDRSCRYFGSSYAGRKAGTYEAIKISHKPP
IMVDPSNHIFLFPTLSSARPQCGWISHVHVKDFQPTAFDDTAVTFSNGKTMELEVSYHSFENQVYRTAYLRTTFQDRMGS
HIPKRQEFMLYPKEERTRMIYDFILRELGERY
Nucleotide
Download Length: 579 bp
>NTDB_id=358324 SB21_RS05490 WP_003155179.1 1044542..1045120(+) (comK) [Bacillus velezensis strain LPL-K103]
ATGTGCCAGAAAACACACGCACCCTTAGAAAGCTACGAAGTAAATCGTTCAACCATCGCTGTTTTGCCTGAGGAAATAGA
CGGTAAAATGGGGTCGAAGGTCATTGAAAAAGACTGCATTCTGTATGTCAGCATGAAGCCGATTCACATCATCGACAGAA
GCTGCCGCTACTTTGGCTCCAGCTATGCCGGGAGAAAAGCGGGAACATATGAAGCGATTAAAATTTCTCACAAGCCGCCG
ATTATGGTGGACCCTTCAAATCACATCTTTTTATTCCCTACACTTTCTTCTGCAAGGCCTCAATGCGGCTGGATATCTCA
TGTGCACGTTAAAGATTTTCAACCGACGGCATTTGATGACACAGCTGTCACGTTCTCAAACGGCAAAACGATGGAACTGG
AAGTATCCTATCATTCTTTTGAAAATCAGGTTTACAGAACCGCCTATCTCAGAACCACTTTTCAGGACAGGATGGGCAGT
CATATCCCGAAGCGGCAGGAATTCATGCTGTATCCGAAAGAAGAGCGGACAAGAATGATCTACGACTTTATTTTGCGGGA
GCTGGGGGAGAGATATTAG
ATGTGCCAGAAAACACACGCACCCTTAGAAAGCTACGAAGTAAATCGTTCAACCATCGCTGTTTTGCCTGAGGAAATAGA
CGGTAAAATGGGGTCGAAGGTCATTGAAAAAGACTGCATTCTGTATGTCAGCATGAAGCCGATTCACATCATCGACAGAA
GCTGCCGCTACTTTGGCTCCAGCTATGCCGGGAGAAAAGCGGGAACATATGAAGCGATTAAAATTTCTCACAAGCCGCCG
ATTATGGTGGACCCTTCAAATCACATCTTTTTATTCCCTACACTTTCTTCTGCAAGGCCTCAATGCGGCTGGATATCTCA
TGTGCACGTTAAAGATTTTCAACCGACGGCATTTGATGACACAGCTGTCACGTTCTCAAACGGCAAAACGATGGAACTGG
AAGTATCCTATCATTCTTTTGAAAATCAGGTTTACAGAACCGCCTATCTCAGAACCACTTTTCAGGACAGGATGGGCAGT
CATATCCCGAAGCGGCAGGAATTCATGCTGTATCCGAAAGAAGAGCGGACAAGAATGATCTACGACTTTATTTTGCGGGA
GCTGGGGGAGAGATATTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comK | Bacillus subtilis subsp. subtilis str. 168 |
82.292 |
100 |
0.823 |