Detailed information NTG0358309

Bioinformatically predicted

Overview

• Name: sbcE
• Type: Machinery gene
• Locus tag: GRT08_RS05030
• Genome accession: NZ_CP047234
• Coordinates: 963942..966824 (+)
• Length: 960 a.a.
• NCBI ID: WP_377803059.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain FJ4
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 958942..971824

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
GRT08_RS05005 (GRT08_04960)	-	959380..960147 (+)	768	WP_007409232.1	enoyl-CoA hydratase	-
GRT08_RS05010 (GRT08_04965)	-	960172..960357 (-)	186	WP_003155259.1	YhzD family protein	-
GRT08_RS05015 (GRT08_04970)	-	960463..961359 (+)	897	WP_003155257.1	ABC transporter ATP-binding protein	-
GRT08_RS05020 (GRT08_04975)	-	961352..962611 (+)	1260	WP_377803058.1	ABC transporter permease	-
GRT08_RS05025 (GRT08_04980)	-	962722..963945 (+)	1224	WP_071392041.1	DNA repair exonuclease	-
GRT08_RS05030 (GRT08_04985)	sbcE	963942..966824 (+)	2883	WP_377803059.1	AAA family ATPase	Machinery gene
GRT08_RS05035 (GRT08_04990)	yhaM	966898..967842 (+)	945	WP_003155251.1	3'-5' exoribonuclease YhaM	-
GRT08_RS05040 (GRT08_04995)	-	967957..968184 (+)	228	WP_025649547.1	sporulation YhaL family protein	-
GRT08_RS05045 (GRT08_05000)	-	968223..969074 (-)	852	WP_003155249.1	peptidylprolyl isomerase	-
GRT08_RS05050 (GRT08_05005)	yhzE1	969233..969319 (+)	87	WP_017417375.1	sporulation protein YhzE1	-
GRT08_RS05055 (GRT08_05010)	yhzE2	969444..969530 (+)	87	WP_003155248.1	sporulation protein YhzE2	-
GRT08_RS05060 (GRT08_05015)	-	969587..969805 (-)	219	WP_003155245.1	hypothetical protein	-
GRT08_RS05065 (GRT08_05020)	-	969866..970396 (-)	531	WP_007409225.1	DUF3267 domain-containing protein	-
GRT08_RS05070 (GRT08_05025)	-	970608..970949 (+)	342	WP_015388481.1	YhaI family protein	-
GRT08_RS05075 (GRT08_05030)	-	970946..971557 (-)	612	WP_003155240.1	HTH-type transcriptional regulator Hpr	-

Sequence

Protein

• Length: 960 a.a.
• Molecular weight: 109786.65 Da
• Isoelectric Point: 7.2232

>NTDB_id=358309 GRT08_RS05030 WP_377803059.1 963942..966824(+) (sbcE) [Bacillus amyloliquefaciens strain FJ4]
MKITAMHIYQYGKFSDRSFQLSDSPVQVIYGLNEAGKTTLMSFIKSVLFGFPKSKKYEPKNGGVYGGTVELKHGDHGAVK
IERTKGAAEKVRVYTASGEIKDGEWLKQLLSDTDRALYEAIYSFDVFGLQEIQAFNRDKIGEFLLYSSLFGSEAAAKLDG
RLAKELDRMYKPNGRNPRLNQELDTLKRLSAQLKQAEAAEAGYHSLLEEKKSAGGRLQDAEARLKDITEEIKTVKSAIEA
KPIADKKTALESELSSYPEALKQFPKDGMHQLEKYESHLHPKAARLEGLRAKAAELRRQAELLAPNEDLLQTERQLQELS
GEQHMYESRGEQLAAIQSQIRQTSARVSSGLQQLGRHEEDGILSLNTDYEYEWRLQEAVQSAGQARERKTQLDAIFDQAR
LELEEAERKHALTAENILDPAVRKEKEAALQSYKQTADTEGNEWQAHIQQLEKQRAKQKKLFLGAGILFIAIFAMLKEWL
PAALFTGALLLYMLSGMQKPLPSERGGADHKKKKPTISKEAADLLQEELWRDGRHRQQLIADQAVLEQKEAAYERVIRQY
EEWEAEMAPSEKQAELFMKELGFSGSPSHLLDAYHVMKDVKKEILNKHELTIEAGRLQKLQRAFEDRVKKLSPSDGRELS
VKERLRDLLAQAERAREEAKRKQALETDLLHAQEQMRELNEEVHYYEQQVKQLFMAAGAKNREHFCELARLNESRRETER
QLREIKTHLSGIGGKQLEPYMSRTVSELEHTVVQKETEKKTLEEKSAQLREQTALLTVKQEQLESSGLVSDLKQQTEMQK
ERVKKTAKEWAALQTVRHITREKMERHKKVTLPRLLETAGALYEPLTDGRYHKLYFSEADDSIMVMRKDGTVFSAGELSQ
AACEQLYATIRFALASERESAVSLPFLLDDSFVHFDRQRLQRLFDVLNQLSEGGRQILYFTCHEHVSRSFHSGQVMRLLS

Nucleotide

• Length: 2883 bp

>NTDB_id=358309 GRT08_RS05030 WP_377803059.1 963942..966824(+) (sbcE) [Bacillus amyloliquefaciens strain FJ4]
ATGAAAATAACGGCGATGCATATTTACCAATACGGAAAATTTTCCGATCGAAGTTTTCAGCTGTCAGATTCTCCCGTGCA
AGTGATCTACGGATTAAATGAAGCGGGTAAAACGACATTGATGTCCTTCATCAAAAGCGTGCTGTTCGGTTTTCCGAAAT
CAAAAAAATACGAACCGAAAAACGGCGGGGTTTACGGCGGCACTGTGGAATTGAAGCATGGCGATCACGGTGCCGTCAAA
ATCGAACGGACAAAAGGCGCTGCCGAAAAAGTCAGAGTGTATACGGCTTCAGGCGAAATCAAGGACGGAGAATGGCTCAA
ACAGCTTCTCTCCGATACAGACCGGGCGCTGTACGAAGCGATCTATTCGTTCGATGTATTCGGACTGCAGGAGATTCAAG
CTTTTAACCGGGACAAAATCGGCGAGTTTCTCCTGTATTCGAGCTTATTCGGGTCGGAAGCGGCGGCAAAGCTTGACGGG
CGGCTGGCAAAAGAACTTGACAGGATGTATAAGCCGAACGGGCGGAACCCCCGCTTAAATCAGGAGTTGGATACATTAAA
GCGGCTCAGCGCCCAGCTGAAACAGGCGGAAGCTGCGGAAGCGGGCTATCACAGCCTTCTGGAAGAGAAAAAAAGCGCCG
GCGGCCGTTTGCAGGATGCCGAAGCACGATTGAAAGACATAACTGAAGAAATCAAAACAGTAAAATCGGCGATAGAAGCA
AAGCCGATCGCAGACAAAAAAACAGCCTTGGAAAGCGAACTTTCTTCTTATCCGGAAGCATTGAAGCAATTCCCGAAGGA
CGGAATGCATCAGCTTGAAAAATACGAATCGCATCTCCATCCGAAAGCGGCCCGTCTTGAGGGGCTTCGGGCAAAAGCGG
CTGAACTCAGGCGGCAGGCTGAGCTGCTCGCTCCAAATGAGGACTTGCTGCAAACAGAGCGGCAGCTGCAGGAGCTTTCC
GGCGAGCAGCATATGTACGAATCGCGCGGCGAACAGCTTGCCGCCATCCAATCACAGATCCGGCAGACATCTGCCCGCGT
TTCGTCAGGATTGCAGCAGCTCGGAAGACATGAGGAAGACGGCATTCTTTCACTGAACACCGATTATGAATATGAATGGC
GGCTGCAGGAAGCCGTGCAGAGCGCCGGACAGGCAAGAGAAAGAAAGACACAGCTTGATGCGATTTTCGACCAAGCGCGG
CTGGAGCTGGAAGAAGCCGAACGAAAACATGCCTTGACGGCGGAAAACATTTTGGACCCCGCTGTCAGGAAAGAAAAAGA
AGCCGCTTTACAATCATATAAGCAAACAGCTGATACAGAAGGAAACGAATGGCAGGCACATATACAGCAGCTGGAAAAAC
AGCGCGCCAAACAAAAAAAGCTCTTTCTCGGTGCGGGCATTCTGTTCATTGCGATTTTCGCTATGTTAAAGGAATGGCTG
CCCGCCGCCCTTTTTACCGGCGCTCTGCTGCTGTATATGCTGTCCGGCATGCAAAAACCGCTGCCGTCAGAAAGAGGAGG
GGCCGATCACAAGAAAAAGAAGCCGACGATCTCCAAAGAAGCGGCTGATCTTCTGCAGGAAGAGCTTTGGCGTGACGGCC
GGCACCGGCAGCAGCTGATTGCGGATCAAGCCGTGCTTGAACAGAAAGAAGCGGCATATGAAAGAGTCATCCGCCAATAT
GAAGAATGGGAGGCGGAAATGGCGCCGTCTGAAAAACAGGCGGAACTTTTTATGAAGGAACTGGGGTTTTCAGGAAGTCC
TTCCCATCTTCTTGACGCATATCATGTGATGAAAGATGTCAAAAAAGAAATCCTTAACAAGCATGAGCTGACCATTGAAG
CGGGCCGGCTGCAAAAGCTGCAAAGAGCATTTGAGGACCGGGTCAAAAAGCTGAGTCCTTCAGACGGAAGGGAGCTGTCC
GTAAAAGAAAGACTGCGCGATTTGCTGGCGCAGGCGGAACGGGCCCGTGAGGAAGCAAAACGAAAGCAGGCGCTCGAAAC
GGATCTGCTGCATGCACAAGAGCAAATGCGTGAATTAAATGAAGAAGTTCATTACTACGAACAGCAGGTCAAACAGCTTT
TCATGGCGGCAGGCGCAAAAAACCGCGAACACTTTTGTGAACTCGCCAGGCTGAATGAAAGCCGCCGGGAAACAGAGCGG
CAGCTGCGCGAAATCAAAACGCACTTGTCCGGCATAGGCGGAAAACAGCTTGAGCCGTACATGAGCCGCACAGTGTCCGA
ACTTGAACATACAGTCGTTCAGAAGGAAACAGAGAAAAAAACGCTTGAGGAAAAAAGCGCGCAGCTTCGTGAGCAAACCG
CTTTATTAACGGTGAAACAAGAGCAGCTGGAGTCCTCGGGGCTTGTATCCGATTTAAAACAGCAGACAGAAATGCAGAAG
GAGCGCGTGAAAAAAACCGCTAAAGAGTGGGCCGCATTACAGACGGTCAGACACATCACCAGGGAAAAAATGGAGCGGCA
TAAAAAAGTGACGCTTCCCCGTCTGTTAGAAACCGCCGGTGCATTATACGAGCCGCTTACGGACGGACGCTACCACAAAT
TGTATTTCTCCGAGGCGGATGATTCCATTATGGTCATGCGGAAAGACGGAACGGTGTTTTCTGCTGGCGAACTCTCACAG
GCGGCATGCGAGCAGCTTTATGCGACGATCCGTTTTGCCCTTGCGTCAGAGAGAGAATCTGCGGTATCATTGCCGTTTTT
ACTTGATGACAGTTTTGTCCATTTTGACAGGCAGCGGCTGCAGCGGCTGTTTGATGTGCTGAATCAGCTCTCAGAAGGCG
GGCGGCAGATACTTTATTTCACCTGCCATGAGCATGTCAGCCGGTCTTTTCACAGCGGACAAGTCATGCGGCTCCTGTCA
TAA

Domains

Predicted by InterProScan.

• AAA domain (AAA_27) (1-199)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
sbcE	Bacillus subtilis subsp. subtilis str. 168	56.639	100	0.569